Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1337 ATGTGTGGAGGTGCTATCATTTCCGACTTAATTGCCGTCAAGAGAGGCCGGAAACTCACCGCCGGCGACCTGTGGTCCGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATACTCCCGCCGGTTCTGCCAAAAACCAACAGCCTCAGAAACTTCCCCAAGTCCTAATCAATAAAGGGGCGGGTGAGAAGAAGGAGAAGAAAAGCTTGAGCGCAGAGAAAGCTGGCGGGAAGAGAGCACGGAAGAACGTGTACAGAGGAATAAGGCAGAGGCCGTGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGAGTGTGGCTCGGCACCTACAACACGGCCGAGGAAGCCGCCAGGGCCTACGACGAAGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAACTCAACTTCCCAGAGGGTCCGCCTCCAGAGCCGGAGCGACCCGCCAAGAAGCGGTGCCTGAGCCCGGAGCTGAGCGAGGCGAGCAGCCACCAGACTGGACCGCCGTCGCCGTATGAGGCGGATCTGGAGCTGAAGCAGCAGATATCAGACCTGGAGTCGCTGCTGGGGTTGGAGCCGGAGGAAGCAACGAGCGAGCTGCAGCAGGTGACGAGCGGGGGAGGGAGCAGCGATGGCGGCGAGTGGGAGGAGTCGCTGGACCTGTGGATGCTGGACGACGTCATGATGAATCACATGCCAAACAGTGAGCTGTTGTACTAA 729 0.6077 MCGGAIISDLIAVKRGRKLTAGDLWSELDPFSDLLGFDTPAGSAKNQQPQKLPQVLINKGAGEKKEKKSLSAEKAGGKRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPEGPPPEPERPAKKRCLSPELSEASSHQTGPPSPYEADLELKQQISDLESLLGLEPEEATSELQQVTSGGGSSDGGEWEESLDLWMLDDVMMNHMPNSELLY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1337 242 Gene3D AP2/ERF domain 84 142 IPR036955 GO:0003700|GO:0006355
Lele23g1337 242 MobiDBLite consensus disorder prediction 135 177 - -
Lele23g1337 242 CDD AP2 85 140 IPR001471 GO:0003700|GO:0006355
Lele23g1337 242 ProSiteProfiles AP2/ERF domain profile. 84 141 IPR001471 GO:0003700|GO:0006355
Lele23g1337 242 SUPERFAMILY DNA-binding domain 84 141 IPR016177 GO:0003677
Lele23g1337 242 MobiDBLite consensus disorder prediction 58 83 - -
Lele23g1337 242 MobiDBLite consensus disorder prediction 196 220 - -
Lele23g1337 242 MobiDBLite consensus disorder prediction 200 214 - -
Lele23g1337 242 MobiDBLite consensus disorder prediction 60 80 - -
Lele23g1337 242 PANTHER DNA-BINDING DOMAIN 65 183 IPR044808 GO:0003700|GO:0009873
Lele23g1337 242 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Lele23g1337 242 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Lele23g1337 242 SMART rav1_2 84 147 IPR001471 GO:0003700|GO:0006355
Lele23g1337 242 FunFam Ethylene-responsive transcription factor 2 83 142 - -
Lele23g1337 242 Pfam AP2 domain 84 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1337 Lele-ChrLele23 18467338 18468843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1337 1 234 AP2-EREBP Transcription Factor Family AT3G16770 45.055 6.62e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele23g1337 AP2 3.1e-15 CL0081