Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1330 ATGGTGGCCGCCGTAGGCGTTGGTCTATCCGGTGCCAACGACGCCTACGATGCCGTTGCGTCCGAGGACGATCACGGTGAGAAGAAACAGATTTCCGCCTCTCAAAAGGACGTCGAAATGCTTTGTAGTTCTGCCCAATACAAAGAAACCTGCAAGCACAGCCTCTCAACTAAAGCAATCAATGGCACCACCGACGTTAAAGAACTCATCAAAACCGCCTTCCACGCCGCCGCCAAGGAATTTAAGAAGTTCATCGACAACTCCACCCTCTTCGACGAGCTTGCCAAGGACAACATGACCAAGCAGGCCATGGAAATCTGCCACGAGGTGCTCGACTACGCCATCGACGACGTTAGGAACTCCATCAATAGCGTCCAACAGTTCCAAATAAGCAAGCTCGGCGAATACGCTTACGACGTTAAGGTTTGGCTAGGAGGCACTATCTCCCACCAGCGCACCTGCTTGGATGGTTTCGAGAACACCACCACTCACGCCGCCGAGACCATGTCCAAGGTTTTGAACACCTCCCTCGAGCTCAGCATGAACTCTTTGGACATTATCTCTGGCCTCTCCGACATCGCCCAAGCCTTCGGATTCGTCGGCTTCGGCGGGCTCGGCGGCGGCGGCATGCAGATAACTCATGGCGATAACAACACCGGCAGCCCGCATCAAGCTCATGGAGATAGCCACACCGGCGGCCAGCAAGCTCGTGGCGATAACAACAACGGGGACCAGCAAGCACATGGGCATGAAAACACCTCCAGTCGGAAGCTTCTCGAGAGCCTGCCGTCGTGGGTAAGTGATAACCAACACCGTCATCTCCTCGCTGCAGCCGCAGCCGGTGCCGCCAATGTTAAGCCCGACGCTGTTGTGGCTCAAGACGGAAATGGGCAGTTCACAACACTCACCGACGCTCTTAAACATGTTCCGAAGGGAAATAAGAAACCCTATGTCATTTACGTTAAGGCCGGCATATATAAGGAGATTGTAAGCATTCCCAAGACATCCAGTTATGTCACCATCGTCGGAGATGGTCCCACCGTCACCAGATTCACCGGCAGTCTCAACTATGCCGACGGCGTCCAAACTTACAAAACCGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTAGGGTTCGAGAACTCTGCCGGAGCAATTAAGCACCAGGCTGTGGCGCTCCGAGTAACAGCAGATAAAGCCGTCTTCTACAACTGCCAAATGGACGGGTACCAAGACACACTCTACGCACAGTCCCACCGCCAGTTCTACCGTGACTGCATCATCTCCGGCACTATCGACTTCATCTTCGGCGACGCCGACATGATCTTCCAAAACTGCACTTTGGTCGTCAGGCCAGCATTAAGCAACCAGAACTGCATCGTCTCCGCCAGTGGCCGAGATGTGATCAACAGCCCCAGCGCCATGGTGTTCCAGAGCTGCCGCTTCACCGCCGATCCGCTCTTCCTCTCCGACAAAGCGCAGAAGCCGGCATACCTTGGACGACCATGGAGGGCATACGCCAAGGTGGTGATCATGGATTCTCAGATCGACGGGATCTTCGCACCCGAAGGTTACTTGTCGTGGATGGGTAGCATCTATCACTTGACCTCCGTCTTCAATGAATACAACAACAAAGGTCCCGGCGCCGATAACTCTCACAGAGTGAAATGGCCCGGAGTGAAAGCGATCACTGCAACTCAAGCTTCAAATTACTATCCTCAAAAGTTCTATGATTTCCGCAATGCAACTTCCTCTGAAGACGATTCCTGGATCTCTGCCGCTGGGATTCCCTACTCCGTTGGTCCCATGGCCGTACCAAATTGA 1836 0.5387 MVAAVGVGLSGANDAYDAVASEDDHGEKKQISASQKDVEMLCSSAQYKETCKHSLSTKAINGTTDVKELIKTAFHAAAKEFKKFIDNSTLFDELAKDNMTKQAMEICHEVLDYAIDDVRNSINSVQQFQISKLGEYAYDVKVWLGGTISHQRTCLDGFENTTTHAAETMSKVLNTSLELSMNSLDIISGLSDIAQAFGFVGFGGLGGGGMQITHGDNNTGSPHQAHGDSHTGGQQARGDNNNGDQQAHGHENTSSRKLLESLPSWVSDNQHRHLLAAAAAGAANVKPDAVVAQDGNGQFTTLTDALKHVPKGNKKPYVIYVKAGIYKEIVSIPKTSSYVTIVGDGPTVTRFTGSLNYADGVQTYKTATFGVNAPYFTAMHVGFENSAGAIKHQAVALRVTADKAVFYNCQMDGYQDTLYAQSHRQFYRDCIISGTIDFIFGDADMIFQNCTLVVRPALSNQNCIVSASGRDVINSPSAMVFQSCRFTADPLFLSDKAQKPAYLGRPWRAYAKVVIMDSQIDGIFAPEGYLSWMGSIYHLTSVFNEYNNKGPGADNSHRVKWPGVKAITATQASNYYPQKFYDFRNATSSEDDSWISAAGIPYSVGPMAVPN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1330 611 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Lele23g1330 611 Gene3D - 285 607 IPR012334 -
Lele23g1330 611 SUPERFAMILY Pectin lyase-like 285 604 IPR011050 -
Lele23g1330 611 SMART PMEI_2 33 186 IPR006501 GO:0004857
Lele23g1330 611 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 191 IPR035513 -
Lele23g1330 611 MobiDBLite consensus disorder prediction 211 256 - -
Lele23g1330 611 PANTHER PECTINESTERASE 37 596 - -
Lele23g1330 611 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 190 IPR006501 GO:0004857
Lele23g1330 611 Pfam Pectinesterase 288 581 IPR000070 GO:0030599|GO:0042545
Lele23g1330 611 FunFam Pectinesterase 34 191 - -
Lele23g1330 611 ProSitePatterns Pectinesterase signature 1. 313 332 IPR018040 -
Lele23g1330 611 CDD PMEI-like_3 41 191 - -
Lele23g1330 611 FunFam Pectinesterase 4 285 606 - -
Lele23g1330 611 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Lele23g1330 611 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 190 IPR035513 -
Lele23g1330 611 MobiDBLite consensus disorder prediction 212 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1330 Lele-ChrLele23 18418730 18420661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1330 1 608 Carbohydrate Esterase AT3G05610 40.722 1.70e-159 471