Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1304 ATGGAGGATTCCGTAGGGCAAAAGAACAAGAGCCGTGAGTTTACTTTGGTATCAGTTGCTGAGCTCTCTTCGCCTGCTTCGTCTGCTTCTCCGGGTATTGCTCGCTTCACTTCCGACTGTCCCGTGGCGCAGCTGCAAATTCATCAAGATTCTCACAAGATTGATATCGATGTTGATCTTCGAACTGCTCAGATATTCAAATTAGGCCCTGTTCAATCAGTTTGCATGGTCGAAGGGTCTGTTGTCGATGACCAGACATCATTCTCAAGGGGAATATCTATCCAGTTTAGAAATGAGGAGGAAAGTGGGGCCTTTGATAGTGTATTCCAGCAATGGAAGAAGGGAGCGAGTGCTCAAGATTCCGGTAGAAGCTTACCAAATGGAATTATACCAAGTTCTACAAGTAAATTTGATGAGAAGATAGAGCCATCTTCTGCAAAAATGTATTTCCATTACTATGGGCAGCTTCTGCATCAGCAAAATATGTTGCAAGACTATGTTAGAACAGGAACCTATTATGCCGCAGTTATTGAGAACCGTGCCGATTTCATGGGCCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAGGCATCTGAAATGACAGAATATGCACGGAAACTTATAGCTGGAAACCCAATGCTCAGTCAACGAATTACAGTGATAAAGGGCAAGGTTGAGGATGTAGAATTGCCGGAGAAAGCGGATATTTTGATCTCTGAGCCCATGGGAACCTTGTTAGTAAATGAAAGGATGTTGGAGTCTTATGTCATTGCTAGAGATAGGTTTCTCACTCCTGAAGGGAAAATGTTTCCCATGGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATCTGTTTATCGAAATTGCCAATAAGGCCTTGTTTTGGCAGCAACAAAACTATTATGGTGTTGATTTGACTCCCTTGTATGGCACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGAGTGTTAATAGCTCCTCCTATGTTCCATGTGTTAGACTTCACAAAAATAAAGGAAGAAGAGCTGTATGAAATAGATATACCTATAAGATTCGTAGCCTCTGTGGGTGCACGAGTACATGGGCTGGCTTGTTGGTTTGATGTACTCTTTAATGGAAGTACTGTGCAAAGGTGGCTTACGACTGCCCCAGGGTCGCCAACAACTCACTGGTACCAGTTGCGCTGTGTTCTTTCTCAGCCAATTTATGTCATGGCGGGACAAGAAATTACTGGCAAGCTCCACATGGTTGCTCACAATGCCCAGAGCTATACGCTATATTTAACATTGTCAGCTAAAATGTGGGGCCCTGGTGCTGAACAAGGAGGGATTCTTCAAACCTCATCGTGCAAACTTGATTTGAAAGAACCATACTATAGAATGTCTCAACCGCAAGCTTACACATTAGCCCAAGACCACCAACAACCACCACTTCTACACACACAGGACATACCAATTCAGTCACAAGATTTAGATGAACCTGAGATGATGCAACAACAGTCGCCTAATTCATGTGCTCAGGTTAATTCATTGATGCAGAATATTTAA 1626 0.4323 MEDSVGQKNKSREFTLVSVAELSSPASSASPGIARFTSDCPVAQLQIHQDSHKIDIDVDLRTAQIFKLGPVQSVCMVEGSVVDDQTSFSRGISIQFRNEEESGAFDSVFQQWKKGASAQDSGRSLPNGIIPSSTSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMTEYARKLIAGNPMLSQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPEGKMFPMVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLYGTAFQGYFSQPVVDAFDPRVLIAPPMFHVLDFTKIKEEELYEIDIPIRFVASVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGKLHMVAHNAQSYTLYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYTLAQDHQQPPLLHTQDIPIQSQDLDEPEMMQQQSPNSCAQVNSLMQNI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1304 541 Gene3D Vaccinia Virus protein VP39 131 289 IPR029063 -
Lele23g1304 541 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 107 472 IPR025799 GO:0016274|GO:0018216
Lele23g1304 541 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 463 IPR029063 -
Lele23g1304 541 Pfam Ribosomal protein L11 methyltransferase (PrmA) 185 258 - -
Lele23g1304 541 CDD AdoMet_MTases 188 288 - -
Lele23g1304 541 FunFam Probable histone-arginine methyltransferase CARM1 129 289 - -
Lele23g1304 541 Gene3D - 291 500 - -
Lele23g1304 541 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 142 457 IPR025799 GO:0016274|GO:0018216
Lele23g1304 541 FunFam Probable histone-arginine methyltransferase CARM1 291 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1304 Lele-ChrLele23 18253043 18258499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1304 149 439 C2H2 Transcription Factor Family AT3G12270 31.962 7.96e-37 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0740 21 4840043 4845453 Lele23g1304 23 18253043 18258499 hybridization
Lele22g0721 22 4740438 4745968 Lele23g1304 23 18253043 18258499 hybridization