Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1299 ATGGCTAGTTCTGAAGGAGAACTTGAAATAAGTTTTGGCTATCAATGCAATAGTAACAGAGTTTCCTCTTCTAATTTAATCGATAACTATAAAATCCTTCCCGCACTCCGTAAAACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACATTAGCCAACACCAACATCTGCGATGGTGTGATAGGAGAAGAAATTCTTCCAAGCTGGGACTCCCCTAATATGTTTCGTAAAGTAGCTTCTTCTTCAAGCCTTTCAAGGTTTGATATGCTGTCATCTTCTCTCCCAAGCACTTTGTCAAATTTAAGTTGCAGTCCATCCACCCCGAGTAATATGCTTGAACATGAAATAAAATCCCCGATCGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTTTTTTGTGCTATTTACGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCCGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATTCAGAAATGGAGACAGATTCTGTCAGTACCTCTAACAATATGGGTTTGGATGGATCAGACCAACATAAGTTGGATGATAGCCTTCATAATTGTGACGAACGATCATTTTCAGATGGGGTACTCGATTGCCTGCAGCGTTCTCTTAGCCAGGTTGAGAATGATTTCTTACACATGGTTGAGCAAGAAATAGAGGATCGCCCGGACTTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAACTGTATACACTTAATATTGGTGATAGCAGAGCAGTATTGGCAATGAGCAGTCGTGAATCAAATGGGGGTGGAAAACTCAAAGCTATCCAGCTTACAGATAGTCACACTGTTGAAAATGAAGCTGAAAGAGCTCAGCTTCTGGCTGATCATCCTGATGATCCTAGGACCATTATATCAGGAAGAGTGAAAGGAAAACTGAAGGTTACTCGCGCAGTTGGAGTTGGCTACTTGAAAAAGAAAAGTCTGAATGACGCATTGATGGGAATTCTTCGGGTTCGTGATCTTGTAAGCCCTCCATATATTTCCGCTGAACCATCATTAGATGTGCATAAGATCTCAAGCTCTGATCATTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCAGTGGAGCTTGTAGAGTCTTATATCCACACCAATCCTTCTGGTGATCCAGCAAAGTTTCTCGTCGAGCAACTTGTATCAAAGGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACAGTAATTGTGATCATCCTTGGCACAAATCATCGGACTTTAAAGGCATCAACTTGCGAAAGCGATATCTCCATGTCTCTTCGCCAGGAGGTAAGGCCACTCTCTTGTCTTGTCTTGACCCAGCTATGCATATGA 1542 0.4222 MASSEGELEISFGYQCNSNRVSSSNLIDNYKILPALRKTSSFSCLSGAALSANATLANTNICDGVIGEEILPSWDSPNMFRKVASSSSLSRFDMLSSSLPSTLSNLSCSPSTPSNMLEHEIKSPIAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYSEMETDSVSTSNNMGLDGSDQHKLDDSLHNCDERSFSDGVLDCLQRSLSQVENDFLHMVEQEIEDRPDLVSIGSCVLLVLLHGNELYTLNIGDSRAVLAMSSRESNGGGKLKAIQLTDSHTVENEAERAQLLADHPDDPRTIISGRVKGKLKVTRAVGVGYLKKKSLNDALMGILRVRDLVSPPYISAEPSLDVHKISSSDHFVIVGSDGLFDFFNNDEAVELVESYIHTNPSGDPAKFLVEQLVSKAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNHRTLKASTCESDISMSLRQEVRPLSCLVLTQLCI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1299 513 Pfam Protein phosphatase 2C 211 430 IPR001932 -
Lele23g1299 513 SUPERFAMILY PP2C-like 147 477 IPR036457 -
Lele23g1299 513 CDD PP2Cc 146 476 IPR001932 -
Lele23g1299 513 ProSiteProfiles PPM-type phosphatase domain profile. 133 476 IPR001932 -
Lele23g1299 513 Gene3D - 107 484 IPR036457 -
Lele23g1299 513 PANTHER PROTEIN PHOSPHATASE 2C 141 474 IPR015655 GO:0004722|GO:0006470
Lele23g1299 513 SMART PP2C_4 127 474 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1299 Lele-ChrLele23 18219396 18222847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1299 6 487 PP2C-type Phosphatase Gene Family AT3G16560 62.753 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0744 21 4887126 4891874 Lele23g1299 23 18219396 18222847 hybridization
Lele22g0727 22 4774351 4776402 Lele23g1299 23 18219396 18222847 hybridization