Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1275 ATGAAATCGAATCGCCAGCGAACGACACGGCGGAGGAGGGAGCAGGAGGATCTGGTGAGGAAAGTAATCTGGCCTTCAATTCGGGGGCATTCTTGCCCGATATGTTTCAGAAACCTCGAAGATCATTATAACGAAGCTGCAATTCTCTCCGTGTGCATGCACGCCTACTGCATCGAATGTATTCGCAAATGGAGTGGCTTGAAAAGAAAGTGTCCTCTCTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAACTCAGTCTTTCCTCTAGAGAGTTACAGAAAGAGGTGTTTCCCTTTGAGGGTTTGACTAGAAATTCTCATCAAGAAATTAGCTCAAGCCGTCTAGATGCTCGTAGACTTCTTCGTAGAACAAGAGCTGCTTTGGATGAAAGCCGAACTAGAGCACTGCCATGGCGGCGATCATTCGGACGTCCTGAACATGCAAGTCCAGAAGTTATCGCTCAAAGGAAACTTGATTGGCGTTCAAGCATATACAAGAAGCAGCTGAAGGCAGTTCCTTTGGCCTCTAGCTATCTTGAGCAGATTAATCCAAGAAATAGTTTTTTAAGAGAAAAAACACTACAGAAGATTGAGCCATGGATAAGGAGGGAGCTACAAGCCGTGCTTGGGGACCCAGATCCAACTGTCATCGTTCATGTGGCAACCTCACAGTACTTTGCATGGCTGGAAGAGAAAGTTAGTTCTGGACAGTTTGATGCTGAAGAGAGGTTTATATCACCCCTGCGTCCTTTCCTGCAAGATAAAGCTAGGATATTTTGGCATGAACTAAGGTGTTATGCTGAGAGTGGTTACAATATTGAAACATATGATGCTGTAGTTGAATGCAAAAACCTAGAGTGA 861 0.4483 MKSNRQRTTRRRREQEDLVRKVIWPSIRGHSCPICFRNLEDHYNEAAILSVCMHAYCIECIRKWSGLKRKCPLCNANFSSWFCKLSLSSRELQKEVFPFEGLTRNSHQEISSSRLDARRLLRRTRAALDESRTRALPWRRSFGRPEHASPEVIAQRKLDWRSSIYKKQLKAVPLASSYLEQINPRNSFLREKTLQKIEPWIRRELQAVLGDPDPTVIVHVATSQYFAWLEEKVSSGQFDAEERFISPLRPFLQDKARIFWHELRCYAESGYNIETYDAVVECKNLE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1275 286 SUPERFAMILY RING/U-box 31 81 - -
Lele23g1275 286 SMART ring_2 32 74 IPR001841 -
Lele23g1275 286 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Lele23g1275 286 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Lele23g1275 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 136 IPR013083 -
Lele23g1275 286 Pfam Ring finger domain 31 75 IPR001841 -
Lele23g1275 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 12 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1275 Lele-ChrLele23 18062903 18065315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1275 8 263 C3H Transcription Factor Family AT2G39100 47.015 1.73e-74 227