Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1260 ATGAAAATTAGACTTCAAGAAGATATTGCCGTATGCGGTGGATATTCACCCCCTCGTGAGGCCACAGTTCAGAAGAGTGACCTTAAAAGAAGCCTCTTCACAGTGTTCAATGTTCTTATATATGCACAAGTTGATGCAAAAAGAGAAATTAAGCTAAGTATCATCATGACTTCTCTTCGTCTCTCTGTGGCAGCTCTGTGCTGTGCATTCGTGGTGTTCGCAGGAACAATATCAGTTTCCTACGCTCAGTTAGATCCTTCCTTTTACAAAACCACATGCGCTACGCTTCATGCGATAGTACGAGAGGTTGTTAATAATGCTTTAAAATCTGATCCTCGTATTGGTGCCAGTCTCATCAGGCTTCACTTCCACGATTGCTTTGTCCAAGGTTGTGATGCATCAATATTATTGAACAAGACGGACACAATAGACAGCGAGCAAGATGCTTTCCCAAATGTGAACTCAATCAGAGGATTGGATGTCGTCAACAACATCAAGTCTGCGGTGGAAGCCGTCTGCCCCTCCACCGTCTCTTGTGCTGATATTCTCGCCATCGCTGCTGAAGTTTCAGTTATTCTGACTAATGGAAACGGGTGGAAAGTTCCCCTGGGACGAAGGGACAGCACAACAGCCAATCGAACACTGGCCGATGCAAACCTTCCAGCTCCCTTCTTCAACTTAACTCTCCTCAAAGACTCCTTCGCTGCTCAGGGCCTCAACTCCACCGATCTGGTTGCTCTCTCTGGTGCACACACATTTGGGAGGTCACACTGCAGCAATTTTGTGGACAGATTATACAATTTCAGTGGCACTGGTCAACCCGATCCAACTCTCAACACAACATACCTTCAAACCCTACGAGGAATCTGCCCTCAAAATGGAGACGGATCCAACTTGACCAATTTCGACCCGACCACTCCCGACAAGTTCGACAAGAACTATTACGACAACCTTCAAATTCACAAGGGCCTACTTAACAGTGACCAAGTCTTGTTCTCCACTTCTGGTGCTGACACCATCGCCATTGTCAATAGCTTTGCTAGCGACCAAGCCCTTTTCTTCACTCAGTTCGCTAATTCCATGATCAAAATGGGTAATCTCAAACCCTTGACTGGTTCTCAGGGTGAAATTCGATCTCACTGTAATTTTGTTAACTCTGATTCCTCTCGTTTGCGTGCTGTCGCTTCCTCCAAAGAATCTGATCGTGATGTTCTTGTCAGCTCAATCTAA 1230 0.4569 MKIRLQEDIAVCGGYSPPREATVQKSDLKRSLFTVFNVLIYAQVDAKREIKLSIIMTSLRLSVAALCCAFVVFAGTISVSYAQLDPSFYKTTCATLHAIVREVVNNALKSDPRIGASLIRLHFHDCFVQGCDASILLNKTDTIDSEQDAFPNVNSIRGLDVVNNIKSAVEAVCPSTVSCADILAIAAEVSVILTNGNGWKVPLGRRDSTTANRTLADANLPAPFFNLTLLKDSFAAQGLNSTDLVALSGAHTFGRSHCSNFVDRLYNFSGTGQPDPTLNTTYLQTLRGICPQNGDGSNLTNFDPTTPDKFDKNYYDNLQIHKGLLNSDQVLFSTSGADTIAIVNSFASDQALFFTQFANSMIKMGNLKPLTGSQGEIRSHCNFVNSDSSRLRAVASSKESDRDVLVSSI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1260 409 FunFam Peroxidase 221 364 - -
Lele23g1260 409 PANTHER PEROXIDASE 72-RELATED 81 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 CDD secretory_peroxidase 83 384 IPR033905 GO:0004601|GO:0042744
Lele23g1260 409 FunFam Peroxidase 87 227 - -
Lele23g1260 409 ProSiteProfiles Plant heme peroxidase family profile. 83 385 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 195 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 157 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 176 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 93 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 242 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 117 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 301 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 359 372 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Plant peroxidase signature 317 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 Pfam Peroxidase 100 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 ProSitePatterns Peroxidases proximal heme-ligand signature. 243 253 IPR019793 -
Lele23g1260 409 Gene3D - 88 385 - -
Lele23g1260 409 SUPERFAMILY Heme-dependent peroxidases 83 385 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 ProSitePatterns Peroxidases active site signature. 115 126 IPR019794 GO:0004601
Lele23g1260 409 PRINTS Haem peroxidase superfamily signature 303 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Haem peroxidase superfamily signature 177 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Haem peroxidase superfamily signature 195 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 PRINTS Haem peroxidase superfamily signature 115 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1260 409 Gene3D Peroxidase, domain 2 221 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1260 Lele-ChrLele23 17975548 17980591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1260 71 385 Peroxidase AT5G06720 60.317 1.07e-134 387