Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1259 ATGTGTTCCTCTATAAATAAATGCTCACTAAGAGCTCTCAGAACACACAAGAACTTGACATTAACACTGACAACAATAAGTTGTCTTGGGGTCTCAGTGGCAGCTCTATGCCGTGCATTGGTGGTGTTCGCAGGAACAATATCAGTTTCATATGGTCAGTTAGATCCTTCGTTTTACGACAAGTCATGTCCAAAAGTGCATTCCATTGTAACAGAGGTTGTTCTTAATGCTTTAAGATCTGATTCTCGTATTGCTGCCAGTCTCATCAGGCTTCACTTCCACGATTGCTTCGTCCAAGCGGGTGGTCCGGGATGGAGTGTTCCACTGGGAAGAAGGGACAGCACAACCGCCAACAGATCACTGGCCAACACAAACCTTCCTCCTCCATTCTTCAACTTGACTCAACTCAAAGCCTCCTTCGCTGCTCAGGGCCTCAACACCATTGATCTCGTTGCTCTCTCTGGTGCTCACACCTTCGGAAGATCACACTGCAGCAATTTCGTGGACAGATTATACAATTTCACTGGCACTGGTCGACCCGACCCGACTCTCAACCCATTGTACCTTCAAATGCTTCGACTGAGATGCCCTAAGGATGGAGACGGCTCCAACTTGGCCAATTTTGACCCGACCACTCCTGACAAGTTCGACAAGAACTATTACAACAACCTTCAATTTCACAGTGGCCTGCTTAACAGTGACCAAGTCTTGTTCTCCACTTCTGGTGCTGACACTATCCCCATTGTGCACAGCTTCGCTTTCAACCAAGAACTGTTCTTCTCTCAGTTCGCAGCTTCCATGATCAAAATGGGTAATATCAGCCCCTTGACTGCCTCTGGTGGCCAAATTCGATCTCACTGTAATTTTATCAACTCACGCTCCTCTGATCCATTCACTAATACCAAACAATCTCATGATGATGCTCTTGTTACCTCTATCTGA 942 0.4639 MCSSINKCSLRALRTHKNLTLTLTTISCLGVSVAALCRALVVFAGTISVSYGQLDPSFYDKSCPKVHSIVTEVVLNALRSDSRIAASLIRLHFHDCFVQAGGPGWSVPLGRRDSTTANRSLANTNLPPPFFNLTQLKASFAAQGLNTIDLVALSGAHTFGRSHCSNFVDRLYNFTGTGRPDPTLNPLYLQMLRLRCPKDGDGSNLANFDPTTPDKFDKNYYNNLQFHSGLLNSDQVLFSTSGADTIPIVHSFAFNQELFFSQFAASMIKMGNISPLTASGGQIRSHCNFINSRSSDPFTNTKQSHDDALVTSI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1259 313 ProSiteProfiles Plant heme peroxidase family profile. 53 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 ProSitePatterns Peroxidases active site signature. 85 96 IPR019794 GO:0004601
Lele23g1259 313 SUPERFAMILY Heme-dependent peroxidases 53 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 PRINTS Haem peroxidase superfamily signature 209 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 PRINTS Haem peroxidase superfamily signature 35 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 Gene3D - 100 291 - -
Lele23g1259 313 PANTHER PEROXIDASE 72-RELATED 52 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 Pfam Peroxidase 99 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 CDD secretory_peroxidase 53 290 IPR033905 GO:0004601|GO:0042744
Lele23g1259 313 PRINTS Plant peroxidase signature 87 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 PRINTS Plant peroxidase signature 235 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 PRINTS Plant peroxidase signature 63 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1259 313 Gene3D Peroxidase, domain 2 127 270 - -
Lele23g1259 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 149 159 IPR019793 -
Lele23g1259 313 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Lele23g1259 313 FunFam Peroxidase 127 270 - -
Lele23g1259 313 Gene3D - 53 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1259 Lele-ChrLele23 17970457 17972889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1259 100 311 Peroxidase AT5G06730 54.717 8.05e-77 237