Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1258 ATGGGTTTTGTGGGAATGAGAATGGTGGGAACTGTTTGGGGCGCCATACTTTTGGTTCTGGGAGCGATATGTGGGGCTCATGCTCAGCTGAGTCCGACCTTCTACGACCAAACATGCCCTAACGTCACCGACATCGTATCCGGGGTAATCCAGAATGCTTCGCAGAGCGATCCTCGTATCGGAGCCAGTCTCATCAGGCTTCACTTCCATGACTGCTTTGTTCAAGGATGTGATGCTTCGCTTTTGCTGAACAACAGTGCCACCATTGTTAGCGAACAAGCAGCTCCGGGCAATAATAACTCCATCAGAGGATTGGATGTTGTCAATAATATCAAATCCGCCCTCGAGTCCTCTTGCCCTAACATCGTTTCTTGCGCCGATATCCTCGCCATTGCTGCTCAAGTTTCTGTCGTCTTGGCAAGAGGGCAGTCATGGACAGTTCAGTTGGGAAGAAGGGACAGCCTAACAGCAAACCTAAGCCTGGCTACTTCTAACCTTCCTTCACCCTTCTTCAACCTCACCCAACTCAAGCAAAACTTCACTTTCCAAGGCCTCGACACCACTGATCTTGTTGCCCTCTCTGGTGCTCACACGTTTGGAAGATCTCAGTGTCGGTTCTTCGATAACCGGCTCTACAATTTTAGCGGCGGCAACCCGGACCCGGACCTCAACACAACCTACTTAGCCACGTTACGTCAGATATGTCCACAGAGCACAGTAGGGAGTAGCACTAACCTCACAAATCTGGACCTGACGACACCTGATACCTTTGACAGCAAATACTTCTCCAACCTTCAGCAAAACAATGGCCTCCTTAACAGTGACCAGGTCTTGTTCTCTACTCAAGATGCTGATACCATCCCCATTGTCAACAATTTCAGCGCCAACCAGACCGCTTTCTTTGAAGCTTTTGCTGCTTCCATGATCAAGATGGGTAATATCAACCCTTTGACTGGTTCACAAGGCGAAATACGAACCCAATGTAATCTTGTTAATGGAGCTTCGGGATTGATGACCGGTGTCACTTCTGAAGAATCGCAGGACGGTTTGGTTAGTTCAATCTAA 1065 0.4873 MGFVGMRMVGTVWGAILLVLGAICGAHAQLSPTFYDQTCPNVTDIVSGVIQNASQSDPRIGASLIRLHFHDCFVQGCDASLLLNNSATIVSEQAAPGNNNSIRGLDVVNNIKSALESSCPNIVSCADILAIAAQVSVVLARGQSWTVQLGRRDSLTANLSLATSNLPSPFFNLTQLKQNFTFQGLDTTDLVALSGAHTFGRSQCRFFDNRLYNFSGGNPDPDLNTTYLATLRQICPQSTVGSSTNLTNLDLTTPDTFDSKYFSNLQQNNGLLNSDQVLFSTQDADTIPIVNNFSANQTAFFEAFAASMIKMGNINPLTGSQGEIRTQCNLVNGASGLMTGVTSEESQDGLVSSI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1258 354 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lele23g1258 354 SUPERFAMILY Heme-dependent peroxidases 29 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 ProSiteProfiles Plant heme peroxidase family profile. 29 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 FunFam Peroxidase 167 311 - -
Lele23g1258 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lele23g1258 354 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 FunFam Peroxidase 33 179 - -
Lele23g1258 354 Pfam Peroxidase 49 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PANTHER PEROXIDASE 72-RELATED 27 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele23g1258 354 Gene3D Peroxidase, domain 2 167 311 - -
Lele23g1258 354 Gene3D - 34 332 - -
Lele23g1258 354 CDD secretory_peroxidase 29 331 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1258 Lele-ChrLele23 17957918 17961357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1258 15 352 Peroxidase AT5G06730 60.294 7.82e-142 404