Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1250 ATGTGGCCGTTTCCGTTGTCCATTCTTTTCCTGGTGAAGCTCTGCTTCATTAGCTTTGCTTTGGGAGTCCAAAGATCTAGAGCAACCATACCAGTGCATTCTTCTCCCATAGAGTCATGGGGAACAATTGCCCCATATACACCAGCTGTACCAAATGGGCCTTTGTTTCACCATTCAGTTACATTATCACCTCCCACCGAGCCATCTGCATCACCAAGTATGAGCATGGCAATATCACCCCCCCCATCATTTAAGGTTGTTCCTCCACCCTCAACTGAGCCATCTGCATCACCTAGTACAAGTGCTACAATGTTACCGCCTACATCATCTAAGGTTGTCCCCCCACCTTCTTCTGAGCCATCTGTATCACCAAGTGCAGGCGCTACAATATCACCACCTCCATCAGATAAGGTTGTTCTTCCACCCTCAATTCAGGTATCTGCACCACCAAGTGCAACAGTATTACCACGTTCATCTCATAAGGTTGTTCCTCCACCCTCAACTTTACAAGGGCAAGTGCCACCTTCAGTACAACCGAGTCCGCCTCGAAGAATAGGACCCACTTTGATGCCTCCAGTCTCCACACCTGATATCCTAGCCCCAGTTGCAACACCTCCTGTCAATTTGCCCAAAATCTCACCGGCCAGCCCACCAACTGAAGATGGAAGTTTTCCACCTATTATTCGCAAAAGAGATGCAAAGAAAGCCCCAGCAGTAGCTTCTACCAATTTGCCAAACAATTCACCAATCAGCCAACCAATTGGACATGGAAGTTTGCCTCCTAATATCCATAGTAGAAATGCAACCTCTCTTGCGCCTCCTACCGGTTTGCCTCAAATTTCACCAGTCAGACAACCAACTACACATGGAAGTTTGCCACCTAAAGTTCATAAAAGGATTCCAAATGAGGATCACACCCCAGAGCCAGCATCGCCAGAATCTGTTGCATCCTCCCCAATAAATGTGCGACATAACCCACCACTAGTTCACCCCATCTCCCCAACTCCACCCATATTACCTGCACCAGTTACATCACCATCAAGTGCATTTCCCGTTAACCCAGTGATACCAGTATTATCTCCATCAGAATTACCAGCACCAGCAATCTCTCCTTCATCAACTCCTTCCAGAATTATCAATTGGAAAAAGGGTGGAGGAGCACCAGTCGCTGTGCCTTCGTATAAACCATCAAAGCCGCTTCCAGCTTCAATACATTCCCCAGCACAAGCCCCTGCTGCACATGAGCATCATCATACAAGGAACATAGTCACCAGTCCTGCTCCTGCATCATCAGATCTAGTCTCTCCTACTTCAATTGACCAAGGTCAAGCAATGCCTCCTTCATTACTCCCAACAAGCACACAAAGACATCATGCTCCACCACCGGCGAACCCAGCTACTACATTCTCTTTCCCAACTTTGCCACCAGCGAGCCAGGTTGCACATGCTCCATCTCCATTGTTCAGATTCGGCCCTCATCCTACTAAAAATTGTTTATCCACTATTTGCACAGAGCCCTATACAAATTCTCCCCCTGGAGCACCTTGCAGATGTGTTTGGCCCATGCAAGTTGGTCTTCGACTCGGTGTTTCTCTTTATACATTCTTCCCTTTGGTTTCAGAACTAGCTTCTGAAATTTCCAGAGGAGTTTTCATGAACCAAAGTCAAGTTCGCATAATGGGAGCTAAATCGGCTGATCAGCAACCAGAGGAAACAGATGTCCTAATTGATTTGGTTCCACTTGGGGAAATTTTTGATAACACTACAGCTTTTTTGACATCTCAGAGATTTTGGCATAAAAAGGTTGCTATAAAAGCTTCTTACTTTGGAGACTATGAAGTTTTATATGTGAGCTATCCAGGCTTACCGCCATCGCCTCCTCTACCGCCGAGCATGACAATGATAGATGGTGGCCCATATTCTAATGGCAATAATGGAATGGCAATAAAGCCCATTGGGGTGGACATAACGAAAAGACAGCATAGGAATCGACTTAGTGGCAGCATGATTGCCATTATTTCACTTTCAGCTTTTGTAGCTGTTATTTTATGTTCTGCTGCTGCATGGGTCTTGTTGTTCAAGCGCAGAGATCATCATGTATCTCAAACAACATCGACTCCTCGGACTTTGCCGCCTTCTCTTTCTAAAACCCCAGGCACTGTTGGGTCATTGACTGGAGTTGGGCCAGTTTCTGCATCTTCATCGTTTCGATCTAGCATCGCGGCTTATAAAGGTTCTGCTAAGACTTTCAGCATGAGTGACATTGAGAGAGCCACTAATAAGTTGCACGATTCAAGAATACTTGGAGAAGGCGGTTTCGGGCGCGTTTATAGTGGTACTCTTGACGACGGTACTAAAGTGGCAGTCAAGGTTCTAAAGAGGGAGGATCATCACGGTGATCGCGAATTCCTAGCTGAAGTCGAGATGCTTAGCCGTTTGCACCATAGAAATTTGGTCAAGTTGATTGGTATATGCACAGAGGAGACATTCCGCTGCTTGGTTTATGAACTCATTTCAAATGGCAGTGTGGATTCCCATTTGCATGGAGATGACAGGGAGACCAGTCCAATTGATTGGGTTGCCCGCATGAAGATAGCTCTCGGTGCTGCTCGAGGTTTGGCTTATCTGCATGAAGATTCAAGTCCCCGTGTAATTCATAGGGACTTCAAGTCTTCCAACATCTTGTTGGAAGATGATTTTACCCCAAAAGTATCTGATTTCGGACTGGCCCGAATAGCAACTGACGAGGAGAACAGACACATATCGACACGCGTCATGGGAACATTTGGTTATGTAGCTCCAGAGTATGCCATGACTGGGCATCTCTTGGTAAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTCTGACTGGAAGAAAGCCAGTAGACATGTCACAACCGCCCGGTCAAGAGAACCTCGTCGCGTGGGCGCGTCCTCTGCTTACAAGCAGAGAAGGACTCGAAGCGATAATCGATCCATCGCTGGAACCCGATGTGCCTTTTGACAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTGCAGCCAGAGGTATCGAACCGTCCTTTCATGGGAGAGGTTGTCCAGGCTTTAAAACTCGTATGTAATGAATGTGACGAAGCGAAAGAAGCAATTTCAAGAAGTTCTAGTAAAGATGATTTGTCTGTTGACTTGGATATGGGAGTCAGTACTGTTTCTGGACAACAACAATCTGATACCTTCCAAGGACAACACTTTGATACAAACATGGACAGAGGAATCGATATCGAAAGAGGGTTATCGGCGTCGGAATTATTCAGTTCATCTGCAAGATTTGGTAGACATGAATCTGGATCGTTTAGAAGAAACTCTTATTCAGGTCCTTTGAGGACTGGAAGAAGCGGGAGATTATGGCATATGTTTAGAAGACTTTCTGGTGGTAGCGTCAGTGAACACGGAATCATGTACAAGTTATGA 3468 0.4596 MWPFPLSILFLVKLCFISFALGVQRSRATIPVHSSPIESWGTIAPYTPAVPNGPLFHHSVTLSPPTEPSASPSMSMAISPPPSFKVVPPPSTEPSASPSTSATMLPPTSSKVVPPPSSEPSVSPSAGATISPPPSDKVVLPPSIQVSAPPSATVLPRSSHKVVPPPSTLQGQVPPSVQPSPPRRIGPTLMPPVSTPDILAPVATPPVNLPKISPASPPTEDGSFPPIIRKRDAKKAPAVASTNLPNNSPISQPIGHGSLPPNIHSRNATSLAPPTGLPQISPVRQPTTHGSLPPKVHKRIPNEDHTPEPASPESVASSPINVRHNPPLVHPISPTPPILPAPVTSPSSAFPVNPVIPVLSPSELPAPAISPSSTPSRIINWKKGGGAPVAVPSYKPSKPLPASIHSPAQAPAAHEHHHTRNIVTSPAPASSDLVSPTSIDQGQAMPPSLLPTSTQRHHAPPPANPATTFSFPTLPPASQVAHAPSPLFRFGPHPTKNCLSTICTEPYTNSPPGAPCRCVWPMQVGLRLGVSLYTFFPLVSELASEISRGVFMNQSQVRIMGAKSADQQPEETDVLIDLVPLGEIFDNTTAFLTSQRFWHKKVAIKASYFGDYEVLYVSYPGLPPSPPLPPSMTMIDGGPYSNGNNGMAIKPIGVDITKRQHRNRLSGSMIAIISLSAFVAVILCSAAAWVLLFKRRDHHVSQTTSTPRTLPPSLSKTPGTVGSLTGVGPVSASSSFRSSIAAYKGSAKTFSMSDIERATNKLHDSRILGEGGFGRVYSGTLDDGTKVAVKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEETFRCLVYELISNGSVDSHLHGDDRETSPIDWVARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARIATDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSREGLEAIIDPSLEPDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEAISRSSSKDDLSVDLDMGVSTVSGQQQSDTFQGQHFDTNMDRGIDIERGLSASELFSSSARFGRHESGSFRRNSYSGPLRTGRSGRLWHMFRRLSGGSVSEHGIMYKL 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1250 1155 MobiDBLite consensus disorder prediction 390 463 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 168 189 - -
Lele23g1250 1155 Gene3D Phosphorylase Kinase; domain 1 734 837 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 240 255 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 703 722 - -
Lele23g1250 1155 PANTHER OS01G0750732 PROTEIN 493 1063 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 58 324 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 262 288 - -
Lele23g1250 1155 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Lele23g1250 1155 Pfam Protein tyrosine and serine/threonine kinase 765 1035 IPR001245 GO:0004672|GO:0006468
Lele23g1250 1155 FunFam receptor-like serine/threonine-protein kinase ALE2 735 837 - -
Lele23g1250 1155 Gene3D Transferase(Phosphotransferase) domain 1 838 1060 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 423 461 - -
Lele23g1250 1155 CDD STKc_IRAK 768 1036 - -
Lele23g1250 1155 ProSiteProfiles Protein kinase domain profile. 762 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1250 1155 ProSitePatterns Protein kinases ATP-binding region signature. 768 790 IPR017441 GO:0005524
Lele23g1250 1155 FunFam Receptor-like serine/threonine-protein kinase ALE2 838 1056 - -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 701 722 - -
Lele23g1250 1155 SUPERFAMILY Protein kinase-like (PK-like) 743 1035 IPR011009 -
Lele23g1250 1155 MobiDBLite consensus disorder prediction 62 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1250 Lele-ChrLele23 17916928 17923416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1250 299 1150 Receptor kinase-like Gene Family AT5G56890 53.708 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele23g1250 PK_Tyr_Ser-Thr 9.2e-49 CL0016