Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1226 ATGGGAAGAAGCCCTTGTTGCTCCAAGGAGGGCTTGAACAGAGGTGCCTGGACCGCTCATGAAGACAAGATCCTCAGAGACTTCATCTCCGTCCATGGCGAAGGACGGTGGCGCAACCTCCCCAAGCGAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTCCGATGGCTAAACTATCTCAGACCAGATATCAAGAGAGGAAATATTACTCCTGACGAAGAAGAGCTTATCATACGCCTTCACAAGCTCTTGGGAAACAGATGGTCTTTGATAGCCGGCAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAATTACTGGAACACGAATTTAGGTAAGAAAGTGAAGCATAATCCTCATCATCACCACATCAATGTCGCTTCCTCTGGTAGATTCTATGCTCAATCTAAGACCGATAAAACTTCCAACAATAATAATCCTCCGAATCTCAGACCAAAATCAAACTCCTTCGCTACTTCTCCAGATTCCAAGCTCAATAATAATGTTGTCCGTACAAAAGCCACCAAGTGCTCTAAGGTCGTCATCCCCCCACGTCCTCCTTCTTCCAGGCAGATGATGAGCAGGTCTGAAGTTGCTGACCCGTTTCGACCGGTGGATGTTGCGGCTGACCGTGACCAGACGACAGAATTGCTCAACGCCTATGATAATAACACGGCGTTGAGCGCGGGGAAGGATCATGATCATGATCATGATCACCAGCAGCCATCGTCTCACGCGGATTTGCTGGTGGATTTCAACGTGGGAGAGATCTGCTTGTCGGACCTTCTGAACTCAGATTTCTCAGATATGTTTGACTTCAGTAACAACAGCGTCGACCGCGGCTTGTCCCCGTCGTCGGACCAACCCTTCGTGTTCTCCGATGAGATTCTGAACGATTGGACGCAGAGAAGCGCGCAAGAGACAAATGTGGGCAATAATCTTCACTCTATCACATCCTTCCTGGAATCGAGCGAGGAATGGCTGGCAGAGTAA 996 0.4869 MGRSPCCSKEGLNRGAWTAHEDKILRDFISVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKHNPHHHHINVASSGRFYAQSKTDKTSNNNNPPNLRPKSNSFATSPDSKLNNNVVRTKATKCSKVVIPPRPPSSRQMMSRSEVADPFRPVDVAADRDQTTELLNAYDNNTALSAGKDHDHDHDHQQPSSHADLLVDFNVGEICLSDLLNSDFSDMFDFSNNSVDRGLSPSSDQPFVFSDEILNDWTQRSAQETNVGNNLHSITSFLESSEEWLAE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1226 331 MobiDBLite consensus disorder prediction 135 175 - -
Lele23g1226 331 FunFam MYB-related transcription factor 13 66 - -
Lele23g1226 331 Gene3D - 14 66 - -
Lele23g1226 331 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 191 - -
Lele23g1226 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele23g1226 331 FunFam Transcription factor TT2 70 151 - -
Lele23g1226 331 Gene3D - 71 147 - -
Lele23g1226 331 CDD SANT 71 112 IPR001005 -
Lele23g1226 331 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele23g1226 331 SMART sant 66 114 IPR001005 -
Lele23g1226 331 SMART sant 13 63 IPR001005 -
Lele23g1226 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele23g1226 331 CDD SANT 16 61 IPR001005 -
Lele23g1226 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele23g1226 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele23g1226 331 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele23g1226 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele23g1226 331 MobiDBLite consensus disorder prediction 135 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1226 Lele-ChrLele23 17714749 17715946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1226 4 116 MYB Transcription Factor Family AT3G13540 75.221 1.57e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele23g1226 Myb_DNA-binding 8.9e-13 CL0123