Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1220 ATGCTGTACTATGGCTTGGCGGTGGTCGGAACCGCGGCCATAGTGTTAACCATGTATAACCTCATCATCATAAGACGGTGCACCCGCAGCCGCCGGCACACGCGAGAGACGACGGGGGACGACCGGCCAGTGGAGGTGGGGATCGCGGCGGGGGGAAGTAGTAGCCGGAGCTTTGAGTTCTCGAACAGGAACCTGCTAGCGAGCTTCAAGTATAAGAAAGAAGCAGGAGAGAAGGAGGAAGGAGGAGGAGGAAGAGGTGAGGAATATGAATGCCCAGTATGCTTATCGGTGTTTGAAGAAGGAGAAGAAGTGAGGAAGCTACCTCGCTGTAATCATTCGTTTCATGCGATTTGTATAGATATGTGGCTTTACTCTCACTTGGATTGCCCAATTTGTCGAACCCCTGTTGGCATATCAGACTGA 423 0.5225 MLYYGLAVVGTAAIVLTMYNLIIIRRCTRSRRHTRETTGDDRPVEVGIAAGGSSSRSFEFSNRNLLASFKYKKEAGEKEEGGGGRGEEYECPVCLSVFEEGEEVRKLPRCNHSFHAICIDMWLYSHLDCPICRTPVGISD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1220 140 FunFam RING-H2 finger protein ATL1 45 138 - -
Lele23g1220 140 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 6 136 IPR044675 -
Lele23g1220 140 SMART ring_2 91 132 IPR001841 -
Lele23g1220 140 ProSiteProfiles Zinc finger RING-type profile. 91 133 IPR001841 -
Lele23g1220 140 SUPERFAMILY RING/U-box 87 138 - -
Lele23g1220 140 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 138 IPR013083 -
Lele23g1220 140 Pfam Ring finger domain 90 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1220 Lele-ChrLele23 17673176 17673598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1220 6 136 C3H Transcription Factor Family AT5G17600 35.766 2.72e-19 80.5