Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1218 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGACTCGCTGAGTCAGCCCGATGATTCCGATTCTAAAAACCAAGCCATCAAATCCCTTACTTCTCAGCTTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGGCCGCCCACGCAGACTCGGCTCCGGAGCAATATCGAGTCAGACACAGATTCAGATCGTTTCCGGTGGTCGTATCGGAGAACGGGGAGCTCAAGCTCGACGACGACGAGGACGTGGGGGAAGGAGATGGAAGCGAGGCTCAAGGGGATTTCGAGTGGAGAAGGGACGCCGAATTCGTCCAGTGGACGGCGAGTGGACCCGCTGGTGTTGTTCGTGGAAGAGAACGAACCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTCTGATCACATTTGTTTCACTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGGTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAATGTTCGAAGATTTAACCGCCAAGCTTTCCCTCTTCCAACGCCCCCAAGATCCGAAGATGAGAGCTCAAAGATTGAATCAGCGGAAGACAGCCCAGTGACACCTCCGCTAACTAGGGAACGTTTACCTCGTAATTTGCACCGTCCTACAGGAATGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAATCAATGCAATCCCGGCATCCCTATGACTCTTATGGTATGAACTCAACTCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCCGAGAAGCTGATCGCTCCGCCGATTTTTCAATCAGCAATGCCAGCGATCTTGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTATATTACCATTAGAGCATTACCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAATTTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATACTTGTAA 1101 0.5077 MLTCIARPKKPGSDSLSQPDDSDSKNQAIKSLTSQLKDMALKASGAYKHCSPCTGPPTQTRLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVDPLVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRHPYDSYGMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSADFSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSRENFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1218 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Lele23g1218 366 MobiDBLite consensus disorder prediction 238 266 - -
Lele23g1218 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Lele23g1218 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Lele23g1218 366 MobiDBLite consensus disorder prediction 197 266 - -
Lele23g1218 366 MobiDBLite consensus disorder prediction 47 69 - -
Lele23g1218 366 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
Lele23g1218 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Lele23g1218 366 MobiDBLite consensus disorder prediction 1 27 - -
Lele23g1218 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1218 Lele-ChrLele23 17655516 17660502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1218 1 366 Major Intrinsic Protein MIP AT1G31880 44.416 6.01e-91 275