LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g1215	ATGAAGAAGGGAAACTTAGGAGGCATCAATCTCAATCTCAAGCTCAATGTTCCTGCTTCTGATCAGGTTTCCTTCGCCAAGTTTCTGACTGAAAGCGGGACGTTTAAGGATGGGGATCTGCTTGTCAATCGGGATGGAGTTCGAATTGTGACTGAGACTGAAGTCGAAGCTGCACCCCCCATCAGGCCACTAGACAACCAGTTAAGTTTGGCAGACATAGATATAATCAAAGTGGTTGGTAAGGGAAATGGTGGGGTTGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTTGCGCTAAAGGTTATCCAAATGAATATTGAGGAGTCCATGCGAAAGCAGATAGCACAAGAGCTTAAAATCAATCAGTCAGCTCAATGTCCATATGTTGTTATTTGCTATCAGTCATTCTATGATAATGGTGCCATATCAATCATCTTAGAGTACATGGATGGAGGTTCTTTAGCAGATCTTCTGAAGAAAGTTAGAACCATTCCGGAAAAATATCTTGCTGCTATCTGTAAGCAGGTGCTTAAGGGTTTGATATATCTTCACCATGAAAAACATATTATCCACAGGGACTTAAAACCTTCTAATCTGTTGATAAACCATAGAGGGGAGGTGAAGATTACTGACTTTGGTGTGAGTGTAATAATGCAAACTACATCTGGTCAAGCAAATACTTTCATCGGCACATACAACTATATGTCTCCAGAGAGAATCGATGGAAGCCAGAATGGCTACAACTACAAAAGTGATATATGGAGCTTGGGGCTGATATTGCTTGAATGTGCTACTGGGCGGTTTCCATATACCCCACCAGATCAAGGTGAAATATGGGAAAGTATTTTTGAGCTAATTGAAACCGTTGTTGATAAACCTCCTCCCTCTGCTCCATCTGATCAATTTTCTCCAGAATTCTGCTCGTTTGTCTCGGCATGTTTACAGAAAGACCCAAAAGATAGACTTTCAGCTCAGGATCTTATGGGACATCCTTTTCTCAACATGTATGGGGACTCGGATGTAGATCTTTCTGCTTATTTCAAGAATGCAGGATCGCCGCTGGCAACTGTGCCTACTTCTACTTGATCATAG	1098	0.4171	MKKGNLGGINLNLKLNVPASDQVSFAKFLTESGTFKDGDLLVNRDGVRIVTETEVEAAPPIRPLDNQLSLADIDIIKVVGKGNGGVVQLVQHKWTNQFFALKVIQMNIEESMRKQIAQELKINQSAQCPYVVICYQSFYDNGAISIILEYMDGGSLADLLKKVRTIPEKYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMQTTSGQANTFIGTYNYMSPERIDGSQNGYNYKSDIWSLGLILLECATGRFPYTPPDQGEIWESIFELIETVVDKPPPSAPSDQFSPEFCSFVSACLQKDPKDRLSAQDLMGHPFLNMYGDSDVDLSAYFKNAGSPLATVPTSTXS	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g1215	365	Gene3D	Transferase(Phosphotransferase) domain 1	153	357	-	-
	Lele23g1215	365	Gene3D	Phosphorylase Kinase; domain 1	51	152	-	-
	Lele23g1215	365	FunFam	Mitogen-activated protein kinase kinase 6	154	354	-	-
	Lele23g1215	365	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	191	203	IPR008271	GO:0004672\|GO:0006468
	Lele23g1215	365	SUPERFAMILY	Protein kinase-like (PK-like)	69	340	IPR011009	-
	Lele23g1215	365	CDD	PKc_MAPKK_plant_like	88	338	-	-
	Lele23g1215	365	SMART	serkin_6	73	335	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele23g1215	365	FunFam	Mitogen-activated protein kinase kinase 6	43	152	-	-
	Lele23g1215	365	PANTHER	DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED	37	352	-	-
	Lele23g1215	365	ProSitePatterns	Protein kinases ATP-binding region signature.	79	102	IPR017441	GO:0005524
	Lele23g1215	365	Pfam	Protein kinase domain	75	335	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele23g1215	365	ProSiteProfiles	Protein kinase domain profile.	73	335	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g1215	Lele-ChrLele23	17636631	17641349	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g1215	1	330	MAP Kinase Kinase Gene Family	AT4G29810	68.142	8.54e-175	488

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Lele23g1215		Pkinase	1.2e-70	CL0016