Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1214 ATGGCAAGTACGGCAACACTGATATTAAATCCTGCAATGGAGAGCTGTGAATTTGTTGGAAGTGATGAAAATCATACAGTTGCTAGTCCACAACAGCAGATTACAGTATCTGCAGGGGTAATGGAGAATCAGGTAGGTGCTTCGCATGTGCCAAAAATGTTCATTAAATGTAACCGTAATTGGACCTCAGATGAAACCCATAATCAGGGAGGGAGGGAAGATGAACACAGGCCAGGGGTTGATTTTCAACGTCTGCATGATTCAAGGTCTCAATCTGTGGCCTGTGACAATTGCAGTATCCTTGGGGAGGAATCTTCGACTTCAGAGATTGATTTACCTAATACTATGGAGGTTGAAGATAATGTCAATGGTATGTACAGTTTGAACGATTCATATACTGTGCAGGAGCCACTGCAAGACATTGTTTCTGTTCCAACATATCCTGAGAGTGAAGATGGTAGTGGGTCGGATCAGCCTGATCCAAAACTAGTTGCTCCACCTCTTGAGATGCCAATGGAGAAAAAGATGTGCAGAGAAAGCTTCCAGAAGGCTTTGGATTTGAATAGTGGACCTCTTTGGGGCTTTTCATCAATTTGTGGAAGGAGACAGGAGATGGAGGATGCTATTGCTGTAAATCCTCATCTTTTGCAAGTTCCTTCACATATGCTAATGGTTGATACTGGGAATGAAAACACTGAAAACTCAGTTGCCCACTTCTTTGCTGTCTATGATGGACATGGAGGCTGTCAGGTTGCTAATTATTGTCGGGAGCGTCTTCATTCAGTGCTTGTTGAGGAGATACAAGATGCAGACTCAAATTTGGATGGAAGTAGTTCGATGGACCATTGGAAGAAGTCATTCTTCAATTGTTTTCAGAAAGTTGATGACAAAGTTGGAGGAATTCATGCTGAGAACAATGAAAACAATAATGATGGATCAGAATCTAGTATTGAACCACTTGCTCCTGAAACTGTTGGTTCTACTGCAGTGGTTGTCATTGTATGCCAAAACCACTTAATAGTTGCAAATTGTGGGGATTCAAGAGCAGTCTTGTGTCGTGGAAAGGAAGCGCTGCCATTATCTTCTGATCACAAACCAAACCGAGAGGATGAGTGGGCCAGGATAGAAGCTGCAGGAGGAAGGATCATACAATGGAATGGGTACCGAGTGCTTGGCGTCTTGGCAGTGTCAAGGTCCATAGGTGATAGGTACTTAAAGCCATGGATTATTCCTACACCAGAAGTCAAGTTGATACAGAGGGAGAAAAAGGACGAGTGCATAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGGAAGCGAATCCTTCTTTGGCACAAGAAGCACGGCAATGGTGAAACGACAGGGCCGGGTGAGGGAGTTGATCCTGCAGCACAGTATGCTGCAGAGTACTTATCCAGAGTTGCCCTCCAAAGGGGAAGTAAAGATAACATTTCTGTTATAGTGATAGACTTGAAGGGTAAAAGAAAATTCAAGACCAAGGCATGA 1536 0.4355 MASTATLILNPAMESCEFVGSDENHTVASPQQQITVSAGVMENQVGASHVPKMFIKCNRNWTSDETHNQGGREDEHRPGVDFQRLHDSRSQSVACDNCSILGEESSTSEIDLPNTMEVEDNVNGMYSLNDSYTVQEPLQDIVSVPTYPESEDGSGSDQPDPKLVAPPLEMPMEKKMCRESFQKALDLNSGPLWGFSSICGRRQEMEDAIAVNPHLLQVPSHMLMVDTGNENTENSVAHFFAVYDGHGGCQVANYCRERLHSVLVEEIQDADSNLDGSSSMDHWKKSFFNCFQKVDDKVGGIHAENNENNNDGSESSIEPLAPETVGSTAVVVIVCQNHLIVANCGDSRAVLCRGKEALPLSSDHKPNREDEWARIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWIIPTPEVKLIQREKKDECIILASDGLWDVMTNEEACEIARKRILLWHKKHGNGETTGPGEGVDPAAQYAAEYLSRVALQRGSKDNISVIVIDLKGKRKFKTKA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1214 511 CDD PP2Cc 194 501 IPR001932 -
Lele23g1214 511 ProSitePatterns PPM-type phosphatase domain signature. 239 247 IPR000222 GO:0043169
Lele23g1214 511 MobiDBLite consensus disorder prediction 303 320 - -
Lele23g1214 511 SUPERFAMILY PP2C-like 190 503 IPR036457 -
Lele23g1214 511 Pfam Protein phosphatase 2C 194 494 IPR001932 -
Lele23g1214 511 SMART PP2C_4 182 499 IPR001932 -
Lele23g1214 511 Gene3D - 180 511 IPR036457 -
Lele23g1214 511 MobiDBLite consensus disorder prediction 301 320 - -
Lele23g1214 511 FunFam Protein phosphatase 2C 51 186 509 - -
Lele23g1214 511 ProSiteProfiles PPM-type phosphatase domain profile. 192 501 IPR001932 -
Lele23g1214 511 PANTHER PROTEIN PHOSPHATASE 151 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1214 Lele-ChrLele23 17633196 17635226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1214 173 510 PP2C-type Phosphatase Gene Family AT4G26080 58.960 3.43e-136 399