Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1204 ATGGATTTGAGATCGATATTTGGAGGTTGCTTTAAGGGGGAGGTTCAAGCGGCGGTGCCGGCGTCGAGGGCCAAGGTGGTGGCCACGAATCAGAGTTCGTACAATTGGGTTTCCGTGTCGGATTTGAGCAATCCGATCAGCGCGTCGCTGACGGAGGATCTGTCGGTGTCGCTCGTTGGATCGAATCTGTATGTGTTTACTCTGGCGGAGATGAAGCTCATCACTCAGGGATTCTCCTCCGGTAACTTTCTCGGAGAAGGTGGGTTCGGACCGGTGCATAAGGGCTTCATCGACGACAAGCTCCGGCCGGGTCTTAAGGCTCAGACCGTCGCTGTTAAGCTCTTGAACTTGGACGGGGCTCAGGGCCACAAGGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTGAGACATTCACACCTTGTGAAACTGATTGGATATTGCTGCGAAGAAGAACACAGGCTTCTGGTCTATGAATATCTTCCCAGAGGTAGCTTAGAGAATCAACTCTTCAGAAGATACTCAGTCTCATTGCCATGGTCTACAAGAATGAAAATCGCAGCCGGAGCTGCAAAGGGTCTTGCCTTTCTTCACGAAGCAGCTAAACCCGTTATCTACAGAGACTTCAAAGCTTCAAACATCTTATTAGACTCAGATTACAACGCAAAGCTATCTGATTTCGGGTTGGCGAAAGATGGTCCTGAGGGAGACGACACGCATGTGTCGACGCGAGTCCTGGGTACTCAGGGCTACGCGGCTCCCGAGTATGTGATGACGGGTCACTTGACCTCGAAGAGTGATATTTATAGTTTTGGAGTAGTTCTATTAGAGCTTCTAACGGGAAGAAGATCAGTGGACAAAACTCGGCCGTCGAGAGAACAAAACCTCGTGGAATGGGCAAGGTCAATGCTGAACGATCCAAGGAAGCTAGGCAGAATCATGGATCCAAGACTTGAAGGTCAATACTCTGAGATGGGTGCAGCCAAAGCTGCGGCATTGGCTTACCAGTGCTTGAGCCACAGGCCCAAGAACAGACCAACTATAAGCCAAGTGGTCAAGACCCTCGAGCCACTTCAGGACTTCGACGACGTCCCCATCGCGCCCTTCGTCTACACAGTTCCGGCCGACGATCGGAGTGACTCCAGGGAAAGCGGCGGCGAGCTACCGAGATCAGAAAGAAAGAATCATCACCGTCGCCACAGACACCCTCTCCGATCACCAACCTCACCGCCTAATAAGTCTGAGAATAATTCATCAGTCTAG 1263 0.5123 MDLRSIFGGCFKGEVQAAVPASRAKVVATNQSSYNWVSVSDLSNPISASLTEDLSVSLVGSNLYVFTLAEMKLITQGFSSGNFLGEGGFGPVHKGFIDDKLRPGLKAQTVAVKLLNLDGAQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAAGAAKGLAFLHEAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVLGTQGYAAPEYVMTGHLTSKSDIYSFGVVLLELLTGRRSVDKTRPSREQNLVEWARSMLNDPRKLGRIMDPRLEGQYSEMGAAKAAALAYQCLSHRPKNRPTISQVVKTLEPLQDFDDVPIAPFVYTVPADDRSDSRESGGELPRSERKNHHRRHRHPLRSPTSPPNKSENNSSV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1204 420 FunFam Probable serine/threonine-protein kinase PBL8 161 371 - -
Lele23g1204 420 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
Lele23g1204 420 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Lele23g1204 420 MobiDBLite consensus disorder prediction 376 392 - -
Lele23g1204 420 MobiDBLite consensus disorder prediction 375 420 - -
Lele23g1204 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lele23g1204 420 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Lele23g1204 420 PANTHER OS01G0588500 PROTEIN-RELATED 49 359 - -
Lele23g1204 420 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1204 420 Gene3D Phosphorylase Kinase; domain 1 42 160 - -
Lele23g1204 420 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1204 Lele-ChrLele23 17566187 17568062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1204 65 355 Glycoside Hydrolase AT3G07070 52.721 7.53e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele23g1204 PK_Tyr_Ser-Thr 4.5e-46 CL0016