Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1196 ATGGCCACTACACTTCCTTCCAAAACTACCTTCCAGTCTCATTCTCTCTCCAACAACCTCCATACCCATTTTGCTCCTTCCTTCAAGCTCTCCCTTGCCTCCAAGCAGAAACCCTACCCGAGGCTCAGAGTATCCAACGCGTTGATCGAACCCGATGGCGGGAAGCTGGTGAATCTCGTTATTGAGGAATCACAGAGGAACGGCAAGAGGAGGGAGGCTTTGTCTTTGCCCAGGATCCAGCTTTGTAAGATTGATGTGGAATGGGTTCATGTGCTCAGCGAAGGGTGGGCTAGCCCACTGAGTGGGTTCATGAGAGAGGCTGAGTTCCTCCAAACGCTTCATTTCAACTCGCTTCGACTCCATGATGGATCGATTGTGAATATGTCGGTTCCATTCGTGCTTGCCATTGATGATGAGCAGAAGCATTTGATCGGCGAGTCCAGAAATGTTGCTCTCTTTGACTCAAAGGGCAATCCTATGGCCATTTTGAAAGATGTTGAGATTTATAGGCACCCCAAGGAAGAGAGGGTAGCTCGTACTTGGGGAACAACTGCCCCTGGCCTACCTTATGCTGAAGAAGCTATAACTCGTGCTGGCAATTGGCTGATAGGGGGTGACCTAGAGGTTATAGAAGCAATCAAGTACCATGATGGCCTTGATCAATTTCGGCTGTCTCCTGCAGAACTCCGTGAAGAGTTCACAAAGCGTGATGCAGATGCTGTGTTTGCTTTCCAGCTCCGAAATCCTGTTCACAATGGTCATGCTTTGCTGATGACTGATACTCGAAAACGACTTCTTGAGATGGGCTATAAGAATCCCATCCTCTTGCTCCACCCACTGGGAGGCTTTACTAAAGCAGATGATGTTCCGCTGGATTGGCGTATGAGACAGCATGAGAAGGTGCTTGAGGATGGTGTTCTTGACCCAGAGACGACAGTAATATCAATATTCCCATCTCCCATGCACTATGCTGGACCAACTGAGGTACAGTGGCATGCAAAGGCTAGGATCAATGCAGGGGCAAACTTCTACATTGTTGGTCGGGACCCTGCAGGCATGGGCCACCCAACTGAGAAAAGAGATTTATATGATGCCGACCATGGGAAGAAGGTGTTGAGTATGGCACCTGGACTCGAGCGTCTAAATATCCTTCCCTTTAGGGTTGCTGCATATGACAAGACTCAGGGCAAAATGGCTTTCTTTGACCCCTCTAGGCCTCAAGATTTCCTCTTTATATCTGGGACCAAGATGAGAACGCTTGCAAAGAATAAACAAAGTCCTCCTAATGGATTCATGTGCCCTGGCGGCTGGAAGGTGCTGGTTGAGTACTATGACAGTTTGGTTCCCTCAAGTGAAGGCAGAACGCCAGAGGCAGTACCAGATGAAGCATTCATGTATTTGCCAAATGGTGGAGTTCTGGGGAATGGCTCGCAGGGTTCTCTTCCCGCTGAGTTTACTTCTTCGGCCGCCAGCTGCATAGCAGAAGAAGCTCCAGTCATCGGCCATGGCGGTTGGCAAGAACAAGAGAATTTCCAAGGGCAAAAAGGGTGGCAAGAAGAAGGCGTGCGTAACTTCCCTTTTCACCACTTTTGCATTCTCTCTTTGCATTCTCTCTTTCGCGTTTTCATTCGGTCCTTTCTTATTTTTAATTTCTGGCTTTTGTTCAGAGCTGATCCCTTTGCTAAGAAGGACTGGTATGATATTAAGGCCCCTTCTGTTTTCCAAGTGAAGAATGTGGGCAAGACCCTCGTCACTCGCACGCAGGGGACCAAGATTGCTTCTGAAGGACTTAAACATAGAGTGTTTGAAGTTTCATTGGCTGATCTCCAAGGTGATGAGGACCATGCCTATAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTGACAAATTTCTGGGGAATGAATTTCACAACTGACAAGTTGAGGTCATTGGTGAGGAAATGGCAAACTTTAATAGAAGCTCATGTGGATGTGAAAACCACTGATAATTACACATTGAGGATGTTCTGCATTGGATTTACAAAGAGACGTGCAAACCAGGTGAAGAGGACCTGCTATGCACAATCAAGCCAGATTAGACAGATCCGTCGGAAGATGAGGGAGATCATGACAAATCAGGCTACCTCCTGTGATTTGAAAGAGTTGGTTCGCAAGTTCATTCCAGAGATGATCGGCAAAGAGATTGAAAAGGCGACATCTAGCATTTACCCTCTGCAAAATGTCTTCATTAGAAAAGTCAAGATTTTGAAAGCTCCCAAATTTGATCTCGGAAAACTGATGGAGGTTCATGGTGATTATTCAGAAGATGTTGGTGTGAAGGTTGACAGACCTGCGGATGAAACGATGGCTGAGGAGACCCAAGAAATTGTCGGAGCTTGA 2394 0.4703 MATTLPSKTTFQSHSLSNNLHTHFAPSFKLSLASKQKPYPRLRVSNALIEPDGGKLVNLVIEESQRNGKRREALSLPRIQLCKIDVEWVHVLSEGWASPLSGFMREAEFLQTLHFNSLRLHDGSIVNMSVPFVLAIDDEQKHLIGESRNVALFDSKGNPMAILKDVEIYRHPKEERVARTWGTTAPGLPYAEEAITRAGNWLIGGDLEVIEAIKYHDGLDQFRLSPAELREEFTKRDADAVFAFQLRNPVHNGHALLMTDTRKRLLEMGYKNPILLLHPLGGFTKADDVPLDWRMRQHEKVLEDGVLDPETTVISIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRPQDFLFISGTKMRTLAKNKQSPPNGFMCPGGWKVLVEYYDSLVPSSEGRTPEAVPDEAFMYLPNGGVLGNGSQGSLPAEFTSSAASCIAEEAPVIGHGGWQEQENFQGQKGWQEEGVRNFPFHHFCILSLHSLFRVFIRSFLIFNFWLLFRADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEETQEIVGA 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1196 797 Pfam ATP-sulfurylase 220 443 IPR024951 GO:0004781
Lele23g1196 797 SUPERFAMILY Nucleotidylyl transferase 221 444 - -
Lele23g1196 797 ProSitePatterns Ribosomal protein S3Ae signature. 597 609 IPR018281 GO:0003735|GO:0005840|GO:0006412
Lele23g1196 797 Pfam PUA-like domain 49 211 IPR025980 -
Lele23g1196 797 SUPERFAMILY PUA domain-like 49 217 IPR015947 -
Lele23g1196 797 Hamap 40S ribosomal protein S1 [RPS3A]. 500 794 IPR027500 GO:0003735|GO:0005840|GO:0006412
Lele23g1196 797 CDD ATPS 76 443 IPR002650 GO:0000103|GO:0004781
Lele23g1196 797 Pfam Ribosomal S3Ae family 557 757 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele23g1196 797 FunFam ATP sulfurylase 2 47 215 - -
Lele23g1196 797 TIGRFAM sopT: sulfate adenylyltransferase 51 442 IPR002650 GO:0000103|GO:0004781
Lele23g1196 797 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 82 447 - -
Lele23g1196 797 SMART Ribosomal_S3Ae_2 556 757 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele23g1196 797 Gene3D Sulfate adenylyltransferase 47 215 - -
Lele23g1196 797 FunFam bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 216 449 - -
Lele23g1196 797 Gene3D HUPs 216 450 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1196 Lele-ChrLele23 17506692 17515384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1196 558 797 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.722 2.53e-149 436