Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1187 ATGTCTGCGTGTTTAAGCGGAGCTACTGGAAGAACTTATGGGTTCGATTTCGATTTTTTCAAATCTCCGTCTATATCGACCCGAACTTCGCATACATCTTCTCCTTCTTCAACTATCTCGGAATCGAGCGATTCTCCAATTGCAATCTCCACTAGAAAATTTCGAACCCCTCGAAAGCGACCCAACCAAACTTACAAGGAAGCTGCCGCAATGCTTTCCACGGCTTACCCAAATCTCTTCCCCTCAGAAAGCCTAAAAAAACCTGGCAAGTTCACCAAAACAGCTGATAATTTCGCGGATGAATCTTCAGAATTGTTCTTCCCTTTCCAAGTATTTGATACCTCCTCTTTCCTACTTCAGCACCAACCAATCCAACAGAAGCCTGGTAATTTTCCAGCGGAGCCAAAAGCGGTTAATCTAACAGAAAAATCGTGCCAGAGTCCAGGGGAGATTAGCTCACGAGTGAATATTACTCAAGAATTTGAGGATGATTGCCGAGAAGATTTTGATGCTGAATCGATTCTCGATGAGGAAATCGGAGAGGGAATCGATATCGATAGCATCATGGGAAGCAGGGCCGAAGATTCCAACGGCGCGTCTTGTCACGACGAACACGTGAATCCCCGGACTGTGGATTTGACGGGATTTAATTTTGGCGGGAATTTCGATTTCCGGCTAAGAGCTCTCCGTGGAGTCGAGGAAGGGAATTATTGGTGGAGCTATCCCGCTGTTGTCAATATGCTTGAAATCTCACCAGAAATAAAAAAGCCTACTCCGGCGGCATCAGTTTCGCTGGAGAAGAAAAGGAAGAAGACGAAGAAGGTGGAAAAGCTGACGACCATCGAATCAAAGATTCCGGAATTGCCGAAGGAGAGTTCAATTCCGCAGGCGAAATCAAGTCCAGGTTTGCTGTTGAAATTGAATTACAACGAGGTTTTGAATGCTTGGTCTGACCGGAGTTCACCCTTCACCGGCGAAAGTGCCGCCTCTGACGCGCCCGGAAATGATATCGCGGCACGGCTGGCACAAATAGATTTGTGGTGGGAGACTGGAGAAGGAGGGGTGTTGAGAGAAGCCAGCGTGATGCGCTACAAAGAAAAGCGCCGTACGCGTCTCTTCTCCAAGAAGATTAGATATCAAGTTAGAAAAGTCAACGCTGATCAACGGCCCAGAACGCAGGGGCGATTTTCTAGGAGGCCCAATGGCTGCTCTAATGCACAAAGCTCATAA 1230 0.4724 MSACLSGATGRTYGFDFDFFKSPSISTRTSHTSSPSSTISESSDSPIAISTRKFRTPRKRPNQTYKEAAAMLSTAYPNLFPSESLKKPGKFTKTADNFADESSELFFPFQVFDTSSFLLQHQPIQQKPGNFPAEPKAVNLTEKSCQSPGEISSRVNITQEFEDDCREDFDAESILDEEIGEGIDIDSIMGSRAEDSNGASCHDEHVNPRTVDLTGFNFGGNFDFRLRALRGVEEGNYWWSYPAVVNMLEISPEIKKPTPAASVSLEKKRKKTKKVEKLTTIESKIPELPKESSIPQAKSSPGLLLKLNYNEVLNAWSDRSSPFTGESAASDAPGNDIAARLAQIDLWWETGEGGVLREASVMRYKEKRRTRLFSKKIRYQVRKVNADQRPRTQGRFSRRPNGCSNAQSS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1187 409 MobiDBLite consensus disorder prediction 25 48 - -
Lele23g1187 409 MobiDBLite consensus disorder prediction 383 409 - -
Lele23g1187 409 Pfam CCT motif 357 398 IPR010402 GO:0005515
Lele23g1187 409 ProSiteProfiles CCT domain profile. 357 399 IPR010402 GO:0005515
Lele23g1187 409 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 25 401 - -
Lele23g1187 409 MobiDBLite consensus disorder prediction 395 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1187 Lele-ChrLele23 17421036 17424031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1187 294 399 C2C2-CO-like Transcription Factor Family AT1G68520 40.000 1.95e-19 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele23g1187 CCT 2.7e-16 CL0281