Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1184 ATGGAGAATATCGGCGAAGAGTATAAGCATTACTGGGAAACCAACAGGTTCCTTCAAACCGAAGAGCTCGACAGTTGGGGATGGGACGAGGCCTTCTCCGGTTGCTACGATTCCAGCTCCCCCGACGGCGCCGCCTCCTCCGCCGCCTCCAAGAACATTGTCTCCGAGCGAAACCGCCGCAAGAAGCTCAACGAGAGACTCTTCTCTCTCAGAGCCGTCGTCCCCAACATTAGCAAGATGGACAAGGCTTCCATAATTAAGGACGCAATCGATTACATCCAGCACTTGCACGAAGAGGAGAGGAATATCGAGGCTGAGATTTCGGAGCTTGAATCAGGGAAGCAGATGAAGCAGGACTCAAGCGATATCGATTACGAGCAAGACCTTCCCCTCTTGCTCCGGTCTAAGAAGAAGAAAACAGAGCATCAGCTTTACGATCCCGTCATCAGTTCAAGACATTCCCCGATCGAAGTCCATGAGCTAAAGGTAACATACATGGGAGAGAAGACGATCGTGGTGAGTTTGACGTGTAGTAAAAGGACAAACACAATGGTGAAACTGTGCGAAGTGTTCGAATCTCTGAAGCTGAAGATCGTGACGGCCACGATAACTTGTTTCTCAGGCAGGCTCGTAAAGACAGTCTTCGTAGAGGCAGACGAAGAAGAGAAAGATCTCTTGGAGATAAAAATCCAAAATGCAATTGCAGCTCTTAATGATCCTGATAGTCCTATGAGCATCTAA 741 0.4885 MENIGEEYKHYWETNRFLQTEELDSWGWDEAFSGCYDSSSPDGAASSAASKNIVSERNRRKKLNERLFSLRAVVPNISKMDKASIIKDAIDYIQHLHEEERNIEAEISELESGKQMKQDSSDIDYEQDLPLLLRSKKKKTEHQLYDPVISSRHSPIEVHELKVTYMGEKTIVVSLTCSKRTNTMVKLCEVFESLKLKIVTATITCFSGRLVKTVFVEADEEEKDLLEIKIQNAIAALNDPDSPMSI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1184 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Lele23g1184 246 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 231 - -
Lele23g1184 246 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
Lele23g1184 246 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 43 115 - -
Lele23g1184 246 Gene3D - 44 113 IPR036638 GO:0046983
Lele23g1184 246 Coils Coil 93 113 - -
Lele23g1184 246 Coils Coil 216 236 - -
Lele23g1184 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Lele23g1184 246 SMART finulus 53 102 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1184 Lele-ChrLele23 17383920 17390308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1184 1 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 62.273 7.55e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele23g1184 HLH 5.2e-12 No_clan