Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1177 ATGAGTCACTTGAAGAATTCGCCTCGTCACCCCAGTGACATTGAGGCCGGAAGTAGCAGCCACGGCGATCATGACGACGCGGAAAGTTCATGCGATCCATTTGTCATTCCCAGAACAAAGGATGCTTCTATTGAACGCCTCAAACGTTGGAGGCAAGCTGCGCTTGTGCTCAATGCTTCTCGTCGGTTCCGTTACACGTTGGACTTGAAAAAAGAAGAGGAGAATCGGCAAATATTGGGGAATGTTAGGGCTCATATGGAAGCAATTAGAGCTGCATATCTGTTCAGAGATGCTATAAACGGGGGGAATGGAATCGCCCCTCCTCCTCCAACCTCAGTTGGTGGTGACTTTGGTATTGGAAATGAACAACTTCTTTCAATTTCTAGGGATCATAAAGTTGATGTTCTCGAGCAATATGGAGGGGCTAGAGGGATATCAGAATTGTTGAAATCTAGTACAGAGAAGGGGATTGATGGAGATGATGCAGATCTATTAAAACGAAGGAATGCCTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGACTTTCCTGATGTTCATGTGGGATGCTTGCAAGGATCTGACCTTGATTATATTAATGGTAGCTGCAGCAGCTTCATTAGCACTGGGAATAAAATCTGAGGTGAGATTGGCTCAGAAAGTTATTTAG 672 0.4449 MSHLKNSPRHPSDIEAGSSSHGDHDDAESSCDPFVIPRTKDASIERLKRWRQAALVLNASRRFRYTLDLKKEEENRQILGNVRAHMEAIRAAYLFRDAINGGNGIAPPPPTSVGGDFGIGNEQLLSISRDHKVDVLEQYGGARGISELLKSSTEKGIDGDDADLLKRRNAFGSNNYPRKKGRTFLMFMWDACKDLTLIILMVAAAASLALGIKSEVRLAQKVI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1177 223 Gene3D - 42 98 - -
Lele23g1177 223 MobiDBLite consensus disorder prediction 1 34 - -
Lele23g1177 223 PANTHER CATION TRANSPORTING ATPASE 80 215 - -
Lele23g1177 223 FunFam Calcium-transporting ATPase 42 98 - -
Lele23g1177 223 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 211 IPR023298 -
Lele23g1177 223 SMART Cation_ATPase_N_a_2 139 212 IPR004014 -
Lele23g1177 223 MobiDBLite consensus disorder prediction 1 31 - -
Lele23g1177 223 Pfam Cation transporter/ATPase, N-terminus 140 207 IPR004014 -
Lele23g1177 223 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 74 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1177 Lele-ChrLele23 17294413 17296103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1177 3 215 Primary Pumps ATPases AT4G29900 61.215 1.47e-83 266