Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1172 ATGGCTGTAGATCTGGTAGTCCTTCCCAGGAAGATGGAAGAACAGATGGCTATTCAAGAAGCTGCTTCCGCTGGATTGAAGAGCATGGAACTTCTTATTCGTCTCCTTAATTCTTCTCAATCTCCGTCCGTTTCTGATAATCATCCCCACCGCCTTGACTGTGCCCAACTCACCGATTTGACTGTTTCCAAGTTTAAGCAAGTCATCAACCTACTCAATCGCACCGGTCACGCTCGCTTCCGTCGTGCTCCTTCCATCACTAATCCTAATCCTCCCTCCTCGTCTTCTTCTGCTCTTCCTAATCCCTCCAAATCTAACCACTCTCAGGGGTTGACCCTTGATTTTGCCAAGCCCTGTAAGGTTAAGACGGCGCCGATTAAACCTTCAACTGAGTTACCCGTGTCTCAGTACTCCAAGGACACTTTTAGTATCTCCCCTCCCATGTCCGCCACTAGCTCCTCCTTTATGTCTTCTATCACCGGAGACGGCAGCGTTTCCGACGGAAAAATAGGCCCCTCGCTGCTTCCTCAACCCGCTCCCGTCGTCTCCTCCGGTAAACCCCCTCTCTCATCGTCTCAACGGAAAAGGTGTCACGACTCTGCCTTCTCTGAGAAAATTTCATCCTCCGCTCACTGCCATTGTTCTAAGAGAAGGAAATCGCGAGTTAAAAAGACGATCCGTGTGCCGGCGATAAGCTCTAAGATCGCCGATATTCCGCCGGACGAGTATTCCTGGAGAAAGTATGGGCAGAAACCGATCAAGGGCTCACCCTATCCTCGTGGCTATTACAAGTGTAGCACCGTAAGAGGATGCCCGGCCAGAAAGCATGTGGAGCGAGCTCAAGACGATCCCAAGATGTTGATCGTAACATACGAAGGGGAGCACCGTCACGCTCTGGAAGTGCGTGCGGCGGAGTGCGGCGGTGCAGGCATCGGTCTTAGCCTTCAAGCCAGCTAA 957 0.5172 MAVDLVVLPRKMEEQMAIQEAASAGLKSMELLIRLLNSSQSPSVSDNHPHRLDCAQLTDLTVSKFKQVINLLNRTGHARFRRAPSITNPNPPSSSSSALPNPSKSNHSQGLTLDFAKPCKVKTAPIKPSTELPVSQYSKDTFSISPPMSATSSSFMSSITGDGSVSDGKIGPSLLPQPAPVVSSGKPPLSSSQRKRCHDSAFSEKISSSAHCHCSKRRKSRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHALEVRAAECGGAGIGLSLQAS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1172 318 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1172 318 MobiDBLite consensus disorder prediction 80 111 - -
Lele23g1172 318 FunFam WRKY transcription factor 65 223 300 - -
Lele23g1172 318 Pfam Plant zinc cluster domain 194 237 IPR018872 -
Lele23g1172 318 SMART WRKY_cls 239 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1172 318 MobiDBLite consensus disorder prediction 86 111 - -
Lele23g1172 318 MobiDBLite consensus disorder prediction 149 202 - -
Lele23g1172 318 Gene3D WRKY domain 227 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1172 318 MobiDBLite consensus disorder prediction 149 164 - -
Lele23g1172 318 ProSiteProfiles WRKY domain profile. 234 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1172 318 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 300 IPR044810 GO:0003700
Lele23g1172 318 SUPERFAMILY WRKY DNA-binding domain 237 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1172 Lele-ChrLele23 17245169 17246399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1172 1 297 WRKY Transcription Factor Family AT2G24570 57.188 1.51e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele23g1172 WRKY 3.4e-26 CL0274