Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1169 ATGGCAATTGCAGCTTCAACCTCATCCTCCACCATGAGGATCACCCATAGCCACAACAACCTGGACGACAACGAGAGGAGTCAGCCGCCGCCACCGGCAGAGGCAGATGACGGAGGCAGCGACGACGGTCACGAGCAGGACGTGGTCATGCCTGGGTTTCGCTTCCACCCAACTGAAGAGGAACTGATTGAGTTCTACCTTCGCCGTAAGGTTGAGGGCAAGCCTTTCAATGTTGAGCTCATTACTTTCCTAGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATTGGAGAGAAGGAATGGTACTTCTATGTGCCGAGAGATAGGAAGTATCGGAACGGTGATCGGCCGAACCGGGTGACGACCTCTGGGTATTGGAAGGCCACTGGAGCTGATAGAATGATCAAAACAGATGGTTTCAGATCCATCGGACTCAAGAAAACCCTAGTCTTTTATTCCGGTAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGAACGAGTACCGCTTGCCCCACCACGAAACCGAACGATTTCAAAAGGCCGAGGTATCTCTTTGTCGAGTGTACAAGAGAGCAGGAGTAGACGATCATCCCTCTCTGCCTCCTTATCTGCCGATAACATCATCATCATCAAGAGCTTCAATATCACACAGCAAGAACAACAGTAAGCACAACGTCAACCAGTTAATGGTTCATCATCAGAACATCAGAGTCCTGGGACAACAGCAATCACATCATGATCAATATCAGACGACAACGAACCAAGTTGTCGATAAAATGAATCCGCAAACTGAGGAAAACAGTACTACTACTGATCACGCCAACAAGTGCAACAACAACAACAACAATCTGGATCATCATCATCAGGACGAAGGCTTAATGCTCATGCAGCAACCAACAAAGCAACAAGTACATACGGAAGCAGCAGCCTCCTCTTTCTTCCACGAAGGGTCCACTACTTCAAATTCTTCCTCTTTACCATCTAATGAAAATATTAATACTGCAATTATGTTGGATGATCATCTCAATCGGCTAGTGAGTTATAATCAGCAGTTGCAGTTGTACAATAACATTTATGCTCCTCCACCTTCTTCTCAAAGTCATCAGCAATATCAGCCCTACATGCAGCTCTCTAACATTCTGTTGCAGCCATCACAGCAATCAACATCATCAATGGCTCTTAATAATTCGCTTCCACCAAACTCTTTCTCTGACAGATTGTGGGAGTGGAATCCAATAATCCCTGAGTCAACAAACCGAGACTTCACCAGCAATATGTCGTCCTTCAAGTAA 1308 0.4618 MAIAASTSSSTMRITHSHNNLDDNERSQPPPPAEADDGGSDDGHEQDVVMPGFRFHPTEEELIEFYLRRKVEGKPFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETERFQKAEVSLCRVYKRAGVDDHPSLPPYLPITSSSSRASISHSKNNSKHNVNQLMVHHQNIRVLGQQQSHHDQYQTTTNQVVDKMNPQTEENSTTTDHANKCNNNNNNLDHHHQDEGLMLMQQPTKQQVHTEAAASSFFHEGSTTSNSSSLPSNENINTAIMLDDHLNRLVSYNQQLQLYNNIYAPPPSSQSHQQYQPYMQLSNILLQPSQQSTSSMALNNSLPPNSFSDRLWEWNPIIPESTNRDFTSNMSSFK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1169 435 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
Lele23g1169 435 MobiDBLite consensus disorder prediction 1 17 - -
Lele23g1169 435 MobiDBLite consensus disorder prediction 1 49 - -
Lele23g1169 435 SUPERFAMILY NAC domain 47 195 IPR036093 GO:0003677|GO:0006355
Lele23g1169 435 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Lele23g1169 435 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 47 302 - -
Lele23g1169 435 FunFam NAC domain-containing protein 35 58 199 - -
Lele23g1169 435 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1169 Lele-ChrLele23 17209957 17212167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1169 1 220 NAC Transcription Factor Family AT2G02450 68.220 1.18e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele23g1169 NAM 4.3e-34 No_clan