Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1167 ATGGAAGACGACGATGGAGCATGCAACACAGGGCTGTGTCTGGGGCTGGGGATAGGAGGGTATGTGCCGAAGAAGAAGAAGAAGGAGATCAGAGAGAATAATAATGATCAAGTGGGTCCTCGCTTGGACCTACCCTTTGAACTTTGCCCCAGAAGATCAGAAGAAACCCTTAATACTACCACGAATCATGAAGAACAAGGTGGAATGTTCAGAAAGAAACTGAGGCTCACAAAGGATCAATCTTCGTTGCTTGAAGAAAGCTTCAAGCTACATACCACTCTTAATCCTGCTCAGAAACATTCTCTTGTTGAGAAGTTGAATCTGAAACCAAGACAGGTCGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAGACAGAGAGAGAGAGCGAGTTGTTGAGGAAATGCTGTGAGAATCTGAGAGATGAGAATCGAAGGTTGAAGGAAGAGTTGCAGGAGTTACGTGCACACAAGGTTGGGACGCCGGCGGCGACTTCGCCGTTGTTCATTCAACTCTCAAAGACGACGGCGGCGTGTTCGTCATGCCAGAAACCATTCAAAGCGAATGACGCAAATATCAATAACAGTAGGAAGCATAAATTGGAGAGCGTGACCTTAGATTGCTATGTGGGGTAA 645 0.462 MEDDDGACNTGLCLGLGIGGYVPKKKKKEIRENNNDQVGPRLDLPFELCPRRSEETLNTTTNHEEQGGMFRKKLRLTKDQSSLLEESFKLHTTLNPAQKHSLVEKLNLKPRQVEVWFQNRRARTKLKQTERESELLRKCCENLRDENRRLKEELQELRAHKVGTPAATSPLFIQLSKTTAACSSCQKPFKANDANINNSRKHKLESVTLDCYVG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1167 214 CDD homeodomain 71 128 IPR001356 GO:0003677
Lele23g1167 214 Gene3D - 64 134 - -
Lele23g1167 214 SMART halz 127 170 IPR003106 GO:0006355|GO:0043565
Lele23g1167 214 SMART HOX_1 69 131 IPR001356 GO:0003677
Lele23g1167 214 Coils Coil 126 160 - -
Lele23g1167 214 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 58 194 - -
Lele23g1167 214 ProSitePatterns 'Homeobox' domain signature. 102 125 IPR017970 GO:0000981|GO:0006355
Lele23g1167 214 Pfam Homeobox associated leucine zipper 127 159 IPR003106 GO:0006355|GO:0043565
Lele23g1167 214 Pfam Homeodomain 71 125 IPR001356 GO:0003677
Lele23g1167 214 ProSiteProfiles 'Homeobox' domain profile. 67 127 IPR001356 GO:0003677
Lele23g1167 214 SUPERFAMILY Homeodomain-like 57 128 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1167 Lele-ChrLele23 17191735 17192626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1167 48 187 Homeobox Transcription Factor Family AT4G37790 54.610 1.10e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele23g1167 Homeodomain 1.7e-14 CL0123