Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1152 ATGCCAGACTGTGTTTGGATTTATCTTCGGTTTTTGAGTTCAAATGATTCTCGTTTACGCGCAATCCCAATTTCTTCGTCAAACGGGTGCTCCTTGGCGTCTGCACGCCAGAAAAAGATTGTAAGCAAAAGCAAGGAGGAAAAAAAAGTGTTCCTGACGAAGCCATTCTCATTAGGGGACACGGATACGGCTTATAGGGCCCCTAATCTCTTGCAACGTATATTAAGCCTATTTAAAAATATACGGCCTGGATCTGATCTCTCTCACTTCCAACTACCGCCTCTGTTTAATTTTCCAAAGTCACAACTTCAGTGCTATGGTGAGTCTGTATACTGCACATCTTCAGACTTGCTAGGCAAATGCAACAGAGAGAAGAATCCAGTGGATAGGTTCACATCAGTGGTTGCATGGTGCATCTCTACTACTCGCCCTACTCTTTTACTTGCTCCTTATAACCCCGTTCTTGGAGAGACCCACCATGCTTCAAGGGGAAATCTCAACGTCCTCCTTGAACAGGTTTCACACCATCCTCCCGTATCTGCTCTTCATGCAACGGATGAGAAAGAGAACATAGAGATGACATGGTGCCAACAACCTAGTCCACAGTTTTATGGCACTTCGGTGGAGACTCAAGTTCTTGGTAAACGGCAACTGAAGCTCCTGAATCATGGAGAAACATATGAAATGAATTGTCCTCACCTCCTAATCAGACTTCTTCCGGTCCCTGATGTTGATTGGGTTGGAAATGTTAATATTCAGTGTCTAGAGACTGGTCTGGTGGCAGAGTTAAGCTACAAAGGTAATTCTTTTCTAGGATTTGGGGGGAACCGTAGATTGATCAAAGGAAAGATCCTCAATTCAACGTCATCAAAAGTTCTTTATGAAGTGGATGGTCATTGGGATAGAACTGTGACTATAAAGGACACAAGTAATAGGAAGGTTAAAGTGATATATGTTGCAAATGAAGTCATTTCAGGGCTCCAAGCTCCAATCGTCCGCGATCCAAAGAGTGTGAAGCCAACGGAGTCAGCCGTGGTTTGGAGTGAGGTTAGCGAAGCCATAATGAACAAAGAATGGGAGAAAGCGAGAGAAGCAAAGAAAGCTGTGGAGGAAAGACAGAGGAAAGTGAAGAGAGAAAGAGAGTCAAGAGGAGAAAATTGGATTCCTAAACATTTTGTTGTGTTTAATAGCAAAGAAGGTGGCTGGGAATGCTCACCCATTGAGAAGTGGGTCCCCTCTGCCCCCATCTTTGGCCTGTAA 1260 0.4413 MPDCVWIYLRFLSSNDSRLRAIPISSSNGCSLASARQKKIVSKSKEEKKVFLTKPFSLGDTDTAYRAPNLLQRILSLFKNIRPGSDLSHFQLPPLFNFPKSQLQCYGESVYCTSSDLLGKCNREKNPVDRFTSVVAWCISTTRPTLLLAPYNPVLGETHHASRGNLNVLLEQVSHHPPVSALHATDEKENIEMTWCQQPSPQFYGTSVETQVLGKRQLKLLNHGETYEMNCPHLLIRLLPVPDVDWVGNVNIQCLETGLVAELSYKGNSFLGFGGNRRLIKGKILNSTSSKVLYEVDGHWDRTVTIKDTSNRKVKVIYVANEVISGLQAPIVRDPKSVKPTESAVVWSEVSEAIMNKEWEKAREAKKAVEERQRKVKRERESRGENWIPKHFVVFNSKEGGWECSPIEKWVPSAPIFGL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1152 419 FunFam Oxysterol-binding protein-related protein 4B 339 411 - -
Lele23g1152 419 FunFam Oxysterol-binding protein-related protein 4C 154 331 - -
Lele23g1152 419 Gene3D - 339 409 - -
Lele23g1152 419 Coils Coil 362 382 - -
Lele23g1152 419 SUPERFAMILY Oxysterol-binding protein-like 72 404 IPR037239 -
Lele23g1152 419 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 74 398 IPR000648 GO:0008289
Lele23g1152 419 Pfam Oxysterol-binding protein 78 349 IPR000648 GO:0008289
Lele23g1152 419 ProSitePatterns Oxysterol-binding protein family signature. 171 181 IPR018494 -
Lele23g1152 419 Gene3D - 154 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1152 Lele-ChrLele23 17058979 17063012 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1152 23 17058979 17063012 Lele17g0548 17 17636307 17640305 CCT
Lele23g1152 23 17058979 17063012 Lele19g0990 19 6256809 6266229 CCT
Lele23g1152 23 17058979 17063012 Lele20g0454 20 12228118 12231715 CCT
Lele17g0534 17 17506586 17509042 Lele23g1152 23 17058979 17063012 CCT
Lele21g0899 21 6058067 6061906 Lele23g1152 23 17058979 17063012 hybridization
Lele22g0900 22 6108012 6112098 Lele23g1152 23 17058979 17063012 hybridization