Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1145 ATGACGACGGAGAAGGAGGGGGGGAGGAAGATGAAGAAGAGTTACTTCGATGTGGTGGGATTGTGCTGTTCATCGGAGGTTCCCATGATTGAGAACATCCTAAAACCTCTGGAAGGAATCAAGGAGGTTTCCGTCATCGTCCCTTCCCGAACCGTCATTGTTATTCACGACACTCTGCTCATTTCACAGTTTCAAATTGCCAAGGCGCTGAACCAAGCGAGAATGGAGGCGAGTGTGAGGGTGTATGGCGATGAAAAGGAGGAGAAGAAGAAGAAGAAGAAATGGCCGAGCCCTTACGCAATGGCATCAGGAATATTGCTGGCAGTGTCACTGTTCAAGTACGTGTATGTCCCACTCGAGTACGTGGCCTTGGGAGCTGTAGCTGCTGGGGCTATTCCCATTCTGCTCAAAGCCCTCTCCTCTCTTCGCCACCTGCGACTTGACATTAACATCCTCATCCTCATCGCAGTTGCGGGAACGATAGCTATTCATGATTATGTGGAAGCTGCCACCATTGTTTTCCTCTTCTCCATTGCTGAATGGCTTGAGTCAAGAGCCAGTCACAAGGCAAGTGCAGCAATGTCATCGTTGATGAACATAGCTCCCCAGAAAGCAACCATAGCCGAAACCAGAGAGATTGTGGACGCCGACGAGGTCAAAGTGAACACCGTCCTAGCCGTTAAAGCAGGGGAAGTGATCCCAATTGACGGAATTGTTGTAGATGGAACCTGTGAAGTCGATGAGAAAACTTTGACCGGCGAGTCATTCCCTGTACCCAAACAAAAGGACTCTACTGTGTGGGCTGGCACTATCAATCTAAATGGTTATATTAGTGTAAAAACTAATGCACTAGCTGAGGATTGCGTGGTGGCCAAAATGGCAAAGCTAGTGGAAGAAGCACAAAACAGTAAAACCAGGAGCCAGAGATTGATAGACAAATTTGCCAAGTTTTATACCCCAGCTGTTGTAATCATATCAACTCTTGTAGCGGTGATTCCAGTTTTGTTGAAAGTGCATAATGCGAAACATTGGTTTCACTTTGCACTTGTCGTTCTAGTAAGCGCGTGTCCGTGTGCCCTTGTCCTTTCTACGCCAGTTGTGACTTTCTGTGCGTACACAAAAGCAGCCACATCAGGTCTTCTCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGTGAATTTATGGTGACAAATTTCCTATCTCTTTGTGATGATGTAGATTTGAAAACGTTGATTTACTGGGTCTCAAGCGTTGAAAGTAAGTCAAGTCATCCATTGGCAGCTGCAATTATTGATTATGGAAAGTCACTTTCTATTGATCCTAAGCCAGAAGAGGTAACAGACTATGAAAATTTTCCTGGAGAAGGTATTCGTGGAAAAATTGATGGGAGATATGTTTACATTGGAAATAGAAAAATTGCCACAAGAGCTGAGTCTAAGACAGTTCCTACCTTAGAAGGTGGCTCTCAAGGAGGAAAGACTATTGGCTATATATACTCAGAAGCAACTCCAATTGGAGTTTTCTCTCTTTCAGATGTTTGCCGATCTGGTGTAGTGGAGGCTATAGGGCAGCTAAAGTTATTGGGTATCAAAACTTCCATGCTTACTGGAGATAGCCATGCAGCTGCCATGCAGGCCCAAGAGCAGCTAGGGCATGCTTTGGAGCAAGTCCACGCAGAACTTTTACCAGAAGGAAAAGCCAAAATCATCACAGAATTCAAAAAGGAAGGACCAACAGCAATGGTTGGAGATGGTGTGAATGATGCACCAGCTTTAGCTGCAGCTGATATTGGTATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAATATAATTCTCATGTCCAATGACATGAGGAAGGTACCACAAGCGATTAAGCTTGCAAGAAAAGCTTGTAGAAAAGTAATCGAAAATATTATATTGTCAGTTGTGACTAAGGCTGCAATTATTGGCTTGGCCTTTGCTGGTCATCCGCTTGTTTGGGCTGCAGTTCTTGCTGATGTTGGGACATGCTTGTTGGTAATCTTAAACAGCATGCTCCTTCTGCACTGTAGAGAGAAGCATAGAGGAAAATGTTGTAGATCTTCCACTCAGCTACACCTCCATAAAAGTGGATGTCATGCCAATGATGGAAAATCTTCTCATCACCACCACCACCACCATCAACACAAGCATGATACTCATCAACATTCCAAAATCATAGAAAGCCATGGCCAATGTAAGTCCAGTGATGAAATCCATGAACCAAATCTCTGTCATCATGGAAGATGTGAGAAAGGTAACGTCCAGTCACTTGATGCAGAAAGCCAGTATTGTTCAAGCTCACAGGATAGGGTAATGATCGGAGCTGATAAGTGTACAACTTCAACAGACAGTCATGGTAGTTGCTTGGAACATGGTAACTCCCACAGCACATCAAATTGCCTCAAAGGAAATTGTGATCCCATCTCTCATGATGAAGTGTCACTGGGTTCTCCCTGCCATTTCATGCACTCACATGATATAGAAAGCCAGGCTTGTTCAGGGTCTTCTCACTCGATTCTGACTGGAGCAGATAAATGTTCGAGTTCAATAGATAATCATGATTGTTTGGAACAAAACTCCCACAAGACATTACATTGCCACAACAGACATTGTGGCCCAGTCAGTCATGATGAAGCATCACTTGTTTCTCCCTGCCGCTTCAATGATTTGGGAATTGCTGAAGATCATAATCTCCGAAATACAATAAGATGCAATCACGAAATTGAGCATCAAAGTCCATGGCCTCTATCTGACTTTCAGGTCTACGGGGATGATCATATTGCATGCAATCATGAAATTAAGCACGCGGAATCGCATGCTTTTGGGAGTTGTGAAGAGCAAGAAAAAGATTCTTGTTGCAAAGGTTGTCCAGACGAATGTAACGAATGTCCTGTTGTGTGCGCGCATCCGTGTTCAAATGAGATAGAAGCTGGTGCGTGTTGTGAGGGCTCTTCAAAGAAATCCATTGAGTTTCCAATGGATCATGCTTGTATTAGTTTGCACAAGAGAAATATTGGTGGGTGTTGCAAGAGCTACATGAAGGAATGCTGTAGCCACCATGGACATTTCAGGGTGGGTTTTGGAGGTTTATCCGAAATTATTACAGAACAGGTGTAG 3201 0.4411 MTTEKEGGRKMKKSYFDVVGLCCSSEVPMIENILKPLEGIKEVSVIVPSRTVIVIHDTLLISQFQIAKALNQARMEASVRVYGDEKEEKKKKKKWPSPYAMASGILLAVSLFKYVYVPLEYVALGAVAAGAIPILLKALSSLRHLRLDINILILIAVAGTIAIHDYVEAATIVFLFSIAEWLESRASHKASAAMSSLMNIAPQKATIAETREIVDADEVKVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLNGYISVKTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDKFAKFYTPAVVIISTLVAVIPVLLKVHNAKHWFHFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFMVTNFLSLCDDVDLKTLIYWVSSVESKSSHPLAAAIIDYGKSLSIDPKPEEVTDYENFPGEGIRGKIDGRYVYIGNRKIATRAESKTVPTLEGGSQGGKTIGYIYSEATPIGVFSLSDVCRSGVVEAIGQLKLLGIKTSMLTGDSHAAAMQAQEQLGHALEQVHAELLPEGKAKIITEFKKEGPTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKVPQAIKLARKACRKVIENIILSVVTKAAIIGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLHCREKHRGKCCRSSTQLHLHKSGCHANDGKSSHHHHHHHQHKHDTHQHSKIIESHGQCKSSDEIHEPNLCHHGRCEKGNVQSLDAESQYCSSSQDRVMIGADKCTTSTDSHGSCLEHGNSHSTSNCLKGNCDPISHDEVSLGSPCHFMHSHDIESQACSGSSHSILTGADKCSSSIDNHDCLEQNSHKTLHCHNRHCGPVSHDEASLVSPCRFNDLGIAEDHNLRNTIRCNHEIEHQSPWPLSDFQVYGDDHIACNHEIKHAESHAFGSCEEQEKDSCCKGCPDECNECPVVCAHPCSNEIEAGACCEGSSKKSIEFPMDHACISLHKRNIGGCCKSYMKECCSHHGHFRVGFGGLSEIITEQV 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1145 1066 Pfam E1-E2 ATPase 208 376 - -
Lele23g1145 1066 FunFam Copper-transporting ATPase 1, putative 187 301 - -
Lele23g1145 1066 SUPERFAMILY Calcium ATPase, transduction domain A 210 297 IPR008250 -
Lele23g1145 1066 SFLD C1.7: P-type atpase like 381 650 - -
Lele23g1145 1066 SUPERFAMILY HMA, heavy metal-associated domain 9 79 IPR036163 GO:0046872
Lele23g1145 1066 MobiDBLite consensus disorder prediction 732 747 - -
Lele23g1145 1066 FunFam Putative cadmium/zinc-transporting ATPase 3 8 81 - -
Lele23g1145 1066 MobiDBLite consensus disorder prediction 724 759 - -
Lele23g1145 1066 SUPERFAMILY HAD-like 397 699 IPR036412 -
Lele23g1145 1066 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 701 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele23g1145 1066 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Lele23g1145 1066 PRINTS P-type cation-transporting ATPase superfamily signature 598 617 - -
Lele23g1145 1066 PRINTS P-type cation-transporting ATPase superfamily signature 622 634 - -
Lele23g1145 1066 PRINTS P-type cation-transporting ATPase superfamily signature 544 554 - -
Lele23g1145 1066 PRINTS P-type cation-transporting ATPase superfamily signature 247 261 - -
Lele23g1145 1066 CDD P-type_ATPase_HM 100 700 - -
Lele23g1145 1066 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 9 703 - -
Lele23g1145 1066 Gene3D - 186 301 - -
Lele23g1145 1066 FunFam Putative cadmium/zinc-transporting ATPase 3 409 530 - -
Lele23g1145 1066 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872
Lele23g1145 1066 Gene3D - 8 81 - -
Lele23g1145 1066 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 497 IPR023298 -
Lele23g1145 1066 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Lele23g1145 1066 Gene3D - 409 530 IPR023299 GO:0000166
Lele23g1145 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 172 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele23g1145 1066 PRINTS H+-transporting ATPase (proton pump) signature 630 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele23g1145 1066 PRINTS H+-transporting ATPase (proton pump) signature 598 614 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele23g1145 1066 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 489 - -
Lele23g1145 1066 SFLD p-type atpase 381 650 IPR044492 -
Lele23g1145 1066 Pfam haloacid dehalogenase-like hydrolase 394 612 - -
Lele23g1145 1066 Gene3D - 389 649 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1145 Lele-ChrLele23 16965909 16975414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1145 9 717 Primary Pumps ATPases AT4G30110 69.437 0.0 1036