Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1122 ATGAAGTATATTCGGAGCAACAGCTTGAAGCGTCTCTTCTCCTTCAAACGACGCAGTTTTGGGGAACGAGTTTTGACCCCTGAAGACACAGAAACTCATCAAAGACGAAGCACTTGGAAATGCTTCTCTTATCAAGAACTGTTTGATGCTACCAAAGGCTTCTGCTCTGAGAATCTGGTTGGAAAAGGAGGTTATGCAGAGGTTTATAAGGGAAAATTAGAAGATGAAGAGGAAATCGCAGTGAAGAGGCTGACAAAATGCTGTAATGACGAGAGGAAAGAGAAGGAATTTCTTACAGAAATTGGAACAATTGGTCATGTTTGTCATTCAAATGTTTTACCTCTTCTTGGTTGCTGTATTGAGAACGGGCTTTACCTCGTCTTTGAGTTTTCCTCCAGAGGCTCTGTTTCTTCTCTTCTTCATGATGAGAATGAGGCTGTGATGGAATGGAAAACAAGGTATAAGATTGCTCTTGGGACTGCACGTGGCCTTCATTACTTGCACAAAGGTTGCCAGAGAAGGATAATTCACAGAGACATCAAGGCCTCCAACGTTCTTTTGACTTCAGATTTTGAACCACAGATATCTGATTTTGGACTGGCAAAATGGCTTCCTTCTCAGTGGACTCATCATTCCATTGCCCCAATTGAAGGCACATTTGGGCACTTGGCTCCAGAGTACTATCTGCATGGAATAGTGGGTGAGAAAACTGATGTATTTGCATTTGGGGTGTTTCTGTTAGAACTCATATCTGGGAAGAAACCTGTGCATGGATCAAACCAGAGTTTACACAGCTGGGCTAGGCCAATATTGAAGAAAGGGGAGCTAGAAAAAGTGGTAGATCCAAGGCTTGAAGGAGCTTATGTTGTTTCAGAGTTAACAAAGCTTGCTTTTGCAGCTTCTCTCTGTATCCGACCATCTTCCCCTTGGAGACCCACCATGACTCAGGTTTTAGAGGTAATGGAGGAGGGGGAAATAGATAAAGATAAATGGAAAATGCCAGAGGAAGAGGAAGAAGAAGATGAGGTATGGGGTTTTGAGGATTTGGAATATGAATATGATAGCTTCTCCTCAATTTCTCTCCCTGATTCCATTACAAGTAATTAG 1107 0.4237 MKYIRSNSLKRLFSFKRRSFGERVLTPEDTETHQRRSTWKCFSYQELFDATKGFCSENLVGKGGYAEVYKGKLEDEEEIAVKRLTKCCNDERKEKEFLTEIGTIGHVCHSNVLPLLGCCIENGLYLVFEFSSRGSVSSLLHDENEAVMEWKTRYKIALGTARGLHYLHKGCQRRIIHRDIKASNVLLTSDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGIVGEKTDVFAFGVFLLELISGKKPVHGSNQSLHSWARPILKKGELEKVVDPRLEGAYVVSELTKLAFAASLCIRPSSPWRPTMTQVLEVMEEGEIDKDKWKMPEEEEEEDEVWGFEDLEYEYDSFSSISLPDSITSN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1122 368 Gene3D Transferase(Phosphotransferase) domain 1 132 346 - -
Lele23g1122 368 FunFam Putative receptor-like serine/threonine-protein kinase 132 345 - -
Lele23g1122 368 PANTHER OS08G0249100 PROTEIN 28 349 - -
Lele23g1122 368 Pfam Protein tyrosine and serine/threonine kinase 58 262 IPR001245 GO:0004672|GO:0006468
Lele23g1122 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Lele23g1122 368 FunFam Putative receptor-like serine/threonine-protein kinase 22 130 - -
Lele23g1122 368 SUPERFAMILY Protein kinase-like (PK-like) 33 321 IPR011009 -
Lele23g1122 368 Gene3D Phosphorylase Kinase; domain 1 17 130 - -
Lele23g1122 368 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1122 368 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Lele23g1122 368 SMART serkin_6 54 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1122 Lele-ChrLele23 16749846 16753515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1122 42 326 Trihelix Transcription Factor Family AT1G70460 43.390 1.05e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele23g1122 PK_Tyr_Ser-Thr 9.7e-41 CL0016