Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1105 ATGGAAACTCCTCCGATGGAATTCATCTTCCGGTCGAAACTCCCCGATATTTACATCCCAGACCACCTCCCACTTCACTCCTACGTCTTCGAGAACCTATCTCAGGTCAAAGATCGACCCTGCCTCATCGACGGCGACACCGGCGAGACCCTTACCTATGCCGACGTCGAGCTCACCGCCCGCCGTGTTGCCGCCGGCCTCACCAAACTCGGCATCCAACAAGGTGACGTCATCATGCTCGTGCTCCGTAACTGTCCCCAGTTCGCTCTGGCCTTCCTGGGAGCCTCCTTCGCCGGCGCCGCAGTCACCACTGCCAACCCCTTGTTCACTCCAGCCGAGCTGGCGAAACAAGCCACCGCGTCCAAGTCGAAACTGATCATAACGCAAGCGGCTTTCGTTGAGAAAATCAAGGATTTCGCTGACAAACGTGGCGTTTCTTTGATGTGCATTGATTCTACTTTCCCAGAAACGGAAGGTATTTCACATTTTTCTTTACTCACCCAAGCCGACGAAGCTTGTATGCCGGCCGTCAAGATCAGCCCCGACGACGTTGTGGCACTGCCGTATTCCTCCGGCACCTCCGGCTTTCCCAAGGGCGTGATGCTAACGCACAAGAATCTGGTGACCTCCGTGGCTCAGCTCGTCGACGGCGAAAACCCGAACCAGTACACCACTAGCGACGACGTACATATCTGCGTTCTTCCAATGTTCCATATCTATGCGCTGAACTCCATTTTGCTCTGCTGCATCCGAGCCGGAGCCGCCATTCTGACGATGGGTAAGTACGACATCGCCACGTTGTTGAAGATGATCAAGACTTACAAGGTGACAATGGCGTCGTTTGTGCCTCCGATCCTATTAAACATCGTGAAGAGTGAGGAAGTTGACCGGCACGACCTGTCGTCCATAAGGACGATCGTCACCGGAGCAGCGCCGGTGAGCGTGGAGCTGGAACAAGCCCTGAGGGCTAAGCTTCCACACGCCATACTTGGACAGGGATATGGGATGACGGAGGGTGGTCCTCTGTCGATAAGCTTGTCGTTCGCGAAGGAGCCGGTGGAGATGAAATCAGGCGCGTGCGGGAGCGTGATAAGAAACGCAGAGATGAAGATTGTTGACATTGAGACGGGAGCTTCGCTTCCAAGAAACAGGGCTGGTGAAATCTGCATTAGAGGAAATCAAGTTATGAAAGGGTACCTAAACGACCCGGAGGCGACGAAAACGACGATAGACGAAGAAGGATGGCTTCACACGGGGGACATCGGACACGTAGACGACGACGACGAGGTGTTCGTTGTGGATCGTTTGAAGGAGATCATCAAATACAAAGGTTTCCAAGTGGCTCCTGCTGAGCTGGAGGCTCTTCTCATCTCTCACCCTCTCATCTCTGATGCTGCCGTTGTTCCGATGAAAGATGAGGCTGCGGGGGAGCTTCCGGTGGCATTTGTGGTTAGGTCAAATGGTTCTAAGATCTCTGAGGATGACATCAAGCTCTTCATTTCACAACAGGTGGTGTATTACAAGAGAATCCACAAGGTTATTTTCACAGACACTATTCCTAAAGCAGTCTCTGGCAAAATTTTACGAAAGGATTTAAAAGCAAGGCTTGCATCAGATTTGGGCAATTAA 1629 0.5255 METPPMEFIFRSKLPDIYIPDHLPLHSYVFENLSQVKDRPCLIDGDTGETLTYADVELTARRVAAGLTKLGIQQGDVIMLVLRNCPQFALAFLGASFAGAAVTTANPLFTPAELAKQATASKSKLIITQAAFVEKIKDFADKRGVSLMCIDSTFPETEGISHFSLLTQADEACMPAVKISPDDVVALPYSSGTSGFPKGVMLTHKNLVTSVAQLVDGENPNQYTTSDDVHICVLPMFHIYALNSILLCCIRAGAAILTMGKYDIATLLKMIKTYKVTMASFVPPILLNIVKSEEVDRHDLSSIRTIVTGAAPVSVELEQALRAKLPHAILGQGYGMTEGGPLSISLSFAKEPVEMKSGACGSVIRNAEMKIVDIETGASLPRNRAGEICIRGNQVMKGYLNDPEATKTTIDEEGWLHTGDIGHVDDDDEVFVVDRLKEIIKYKGFQVAPAELEALLISHPLISDAAVVPMKDEAAGELPVAFVVRSNGSKISEDDIKLFISQQVVYYKRIHKVIFTDTIPKAVSGKILRKDLKARLASDLGN 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1105 542 Pfam AMP-binding enzyme 31 442 IPR000873 -
Lele23g1105 542 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Lele23g1105 542 Gene3D - 2 436 IPR042099 -
Lele23g1105 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Lele23g1105 542 SUPERFAMILY Acetyl-CoA synthetase-like 9 538 - -
Lele23g1105 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 437 - -
Lele23g1105 542 CDD 4CL 19 532 - -
Lele23g1105 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Lele23g1105 542 Gene3D - 437 539 IPR045851 -
Lele23g1105 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1105 Lele-ChrLele23 16597054 16604215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1105 7 504 Monolignol Biosynthesis Gene Families AT1G51680 64.881 0.0 652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1105 23 16597054 16604215 Lele23g1105 23 16597054 16604215 ECH
Lele21g0947 21 6525454 6532560 Lele23g1105 23 16597054 16604215 hybridization
Lele22g0949 22 6611633 6612856 Lele23g1105 23 16597054 16604215 hybridization