Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1099 ATGGGTCGAGCTCCATGCTGTGACAAGGCTAATGTCAAGAAAGGGCCATGGTCCTCCGAAGAAGACGCTAAACTCAAAGCCTACATCGAAAAACTGAGATGGTTAAATTATCTGAGGCCTAATATCAAGCATGGTGGCTTTACTGAAGAAGAAGACAACATCATCTGTAGCCTTTACATTAGTATCGGAAGCAGGTGGTCGATAATCGCAGCACAGCTACCAGGAAGAACAGACAATGACATAAAGAACTACTGGAACACCAGATTGAAGAAGAAGTTACTGGGAAGAAGAAAACAATCTTCTGGTTTCAATAATCCAAGAGACAGAAACGAACTTGATGATTCATCAAATGCCCTAAGCAACTCGGCTCTTGAACGCCTTCAACTTCATATGCAACTTCATCATCATCAAGGCCTCCAAAACCAAAACCCTACAACTTTCTCTAATTTCTTCAATAATCCTGCCTTCCTCTGGCCCACCACCACTAAGCTCCATCATCCTCTGATGACTGGTAATGATAATAAAAACCCTGATCAGTCACAGAAAGAACATGAGCAATTCTACAAATCTAGTACCTCTCTTCAACAACAAGAACATGATGAAAAGATCAACGGTTCTTCTTCACAGGTTGACATGTCGGTTCCTTTCATGGCCTCGGGGATTGAAGAAGGAGTTCATAATCCGCAGCAGCAGAATCATCAGCAAGTTTCTGCACTTCAAGCTGAGTTGCATGAGATTATTCTCAGCAATAATATGACGACACAGCAGGATAATCAAGATGAGATGGCTGATTTAGATTGTTTTGCAGAGATGAATTCGAATGATTCTTCGAAGGACATGAACTTGATGAACATTTGGTGGTCCAATAATGAATTAATGGCCAAATCAGCATCTTCCAATTCTTGGGGTTCAAGTACAAGCACAAGTACTGCTACTGTTCTTCATCCAGAAGGGACGTTTCAAGATAATTATAATGAACTCGTGGCCGGTTATAGTTTATAG 1002 0.4122 MGRAPCCDKANVKKGPWSSEEDAKLKAYIEKLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSGFNNPRDRNELDDSSNALSNSALERLQLHMQLHHHQGLQNQNPTTFSNFFNNPAFLWPTTTKLHHPLMTGNDNKNPDQSQKEHEQFYKSSTSLQQQEHDEKINGSSSQVDMSVPFMASGIEEGVHNPQQQNHQQVSALQAELHEIILSNNMTTQQDNQDEMADLDCFAEMNSNDSSKDMNLMNIWWSNNELMAKSASSNSWGSSTSTSTATVLHPEGTFQDNYNELVAGYSL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1099 333 MobiDBLite consensus disorder prediction 167 208 - -
Lele23g1099 333 PANTHER OS09G0431300 PROTEIN 1 31 - -
Lele23g1099 333 CDD SANT 47 89 IPR001005 -
Lele23g1099 333 SMART sant 43 91 IPR001005 -
Lele23g1099 333 MobiDBLite consensus disorder prediction 186 208 - -
Lele23g1099 333 FunFam Transcription factor MYB36 46 115 - -
Lele23g1099 333 SUPERFAMILY Homeodomain-like 32 93 IPR009057 -
Lele23g1099 333 Pfam Myb-like DNA-binding domain 45 87 IPR001005 -
Lele23g1099 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Lele23g1099 333 MobiDBLite consensus disorder prediction 96 116 - -
Lele23g1099 333 Gene3D - 46 117 - -
Lele23g1099 333 ProSiteProfiles Myb-like domain profile. 9 89 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1099 Lele-ChrLele23 16546956 16548268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1099 1 208 MYB Transcription Factor Family AT5G57620 54.733 2.17e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele23g1099 Myb_DNA-binding 4.7e-10 CL0123