Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1074 ATGCCTAGAGATTCTCGATTCTCTTTAACAAACATTCAAGAATCGAATATCATCGTCTGCCCTACAAGCACCAGACAAGTAGACAACCTTCCACACAATTGCCCCATACTTCAGACTTCGACACACAACCACTTATCATTCGAACATCATGCAAAGTCAGTACCAGAATCCCACTATCTCAACAAAAAGAAAATCTTCCAACTGCATGATTCAACTCTAAATTCTGCAGAAATGGGTAGACGAAGTAGAACTCTAGCACAACTTAAAAGCGAAGCCTTTGAGCCTCCTCCTTCAGAGCAACCACCACCGTTCTATCTTTCTCGGCCACGTCTTCCTTCTTCTTCTTCACCACCCAATTTTGGATCTGACAACAATGGTTTCTTGAATTTAAACGACAAGGTAAGTCCAAGCATGCTACTTGTCATCATAATTCTGGCCATTGTTTTCTTCGTTTCTGGGTTGATTCACCTTCTAGTTAGATTCCTATGGAGACCTCAACCCAGAGAACCAGATGATTCAGACAATGTGTCTGCTCTTCAAGGTCAATTACAGCAACTGTTTCATCTTCATGATGCTGGCGTTGACCAGTCCTTCATAGATAACACCCTCCCTGTGTTCCATTACAAAGCAATCATAGGATTGAAAGACCCATTTGATTGTGCTGTGTGCTTGTGTGAATTTGAAGCTGATGATAAACTCAGATTGTTACCTAAATGCAGCCATGCTTTTCACATGGAGTGCATTGATACTTGGCTCTTGTCTCACTCAACTTGCCCTCTCTGTAGAGCTAGCCTGCTCTCTGCTGATTTCTCTCCCACGAACCCTTCTTCTTCCTCTTCTCCGTTCGTCTTCGTTCTAGAATCTGGGAGTGAAAGTTCCAGAGAGATTATTGTTCCAGAAAGAGAGAATAGGACCAGTTCTGTGATTGCAGATAACGTACATGTAGATTTGTCACACAAATCTGTTGATTTAAATTCAGATTCTGCTAATAATCCTGATCAGATTCCTTTTGGGGAATCGCATGAGAAAGTGGTCACTGTGAAGCTGGGGAAGTTCAGGAATGTCGGTGAAGGAGGAAGCAGTGAAGAAGACATGGGAAGAGAAGTAGCTAGAAGGTGTCTTTCAATGGGGTCATTTGCTTATGTTATGGACGAGAATTCTTCACTTCAGGTACCAGTAAGAGCGACGATGAAGAAGCAATCAAGTAAGAAACCTGCTTTACCTTTAACACCAGGAAGAAGGATTGCCATGTCAGAATGTGATTGTGAATCCACGAGAGATTTCAAGTTTACAGGTTTTGAAGCAGTGAAAGGTGTTGTTGATGAGAAGAATTCTTCTGAAACTGCAAGTATTGAGAGAAGCAGAAAAGAGAGCTTCTCTGTTTCAAAGATTTGGCTTCGAGGAAAGAAAGAGAAGCCGCAAGCCATGGCTGATGATTCTTCCTCGAGGAGGGCTGTTTCGTTTCGATTTGCAGAAGCGAGGGACGATGATGTTGATGATTCGAAGGAGAAGAATGGGAAATCTAAGATGGAGATTGGGAAATGGGAAAATGATGATGAAAACCAGAGCTGTTACAGTGTGGATTCTCAGGGAAGAGAACCGTCTTTTGCAAGAAGAACTCTGCTTTGGCTTACTGGAAAACAGAACAAGGTTGTTCATTCATCTTCGGATTCAAACTTGTAG 1683 0.4231 MPRDSRFSLTNIQESNIIVCPTSTRQVDNLPHNCPILQTSTHNHLSFEHHAKSVPESHYLNKKKIFQLHDSTLNSAEMGRRSRTLAQLKSEAFEPPPSEQPPPFYLSRPRLPSSSSPPNFGSDNNGFLNLNDKVSPSMLLVIIILAIVFFVSGLIHLLVRFLWRPQPREPDDSDNVSALQGQLQQLFHLHDAGVDQSFIDNTLPVFHYKAIIGLKDPFDCAVCLCEFEADDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLSADFSPTNPSSSSSPFVFVLESGSESSREIIVPERENRTSSVIADNVHVDLSHKSVDLNSDSANNPDQIPFGESHEKVVTVKLGKFRNVGEGGSSEEDMGREVARRCLSMGSFAYVMDENSSLQVPVRATMKKQSSKKPALPLTPGRRIAMSECDCESTRDFKFTGFEAVKGVVDEKNSSETASIERSRKESFSVSKIWLRGKKEKPQAMADDSSSRRAVSFRFAEARDDDVDDSKEKNGKSKMEIGKWENDDENQSCYSVDSQGREPSFARRTLLWLTGKQNKVVHSSSDSNL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1074 560 SMART ring_2 220 261 IPR001841 -
Lele23g1074 560 MobiDBLite consensus disorder prediction 494 533 - -
Lele23g1074 560 CDD RING-H2_PA-TM-RING 219 262 - -
Lele23g1074 560 ProSiteProfiles Zinc finger RING-type profile. 220 262 IPR001841 -
Lele23g1074 560 SUPERFAMILY RING/U-box 201 267 - -
Lele23g1074 560 MobiDBLite consensus disorder prediction 494 518 - -
Lele23g1074 560 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 269 IPR013083 -
Lele23g1074 560 MobiDBLite consensus disorder prediction 92 118 - -
Lele23g1074 560 Pfam Ring finger domain 219 262 IPR001841 -
Lele23g1074 560 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 131 465 - -
Lele23g1074 560 FunFam RING-H2 finger protein ATL46 181 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1074 Lele-ChrLele23 16307135 16311358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1074 124 556 C3H Transcription Factor Family AT2G18650 47.884 7.39e-95 294