Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1071 ATGCAAAATCCCAGGTCAGAGAAGCTAGAATTTCTGCAGAAATGGATGGAGGGTATGGGAAAATGCACGTCCCTTAAGAAGAACATGAGCTTGTTGGAGAGGAAGAAGGCCATAAAAGTTTCAGCAGATTTAGCCATGGCTTCTACCAGAACTGAATCCAAGTGTTGGAGCCGAGCCCTTATTGCCAATATTGCTTCCAGAGACCACAACAGCAAACTCCTTACAGAGCACATAATAGGGTCTTCACAGTGCTTCAGGCTAAGAAAAGCTTTCACTTCTCCTCCTCCTTCTCCTTCTTCTTCGTCTCTGCTCAAGAACAAGAAGATGCTTGATAGAAGTAGAACGAAGATAATGAAGAGAAGGCGCCGTACAATTCGCTGTAGAGTGAAGAAAATAGTGATGGCGGATTCTATTGCAAGGAAGCTGGTCCAAAAGAGAACACAAATGCTTAAGAAGCTTGTTCCAGGTGGCGATCTTATGGACGATGATGTGTCTTTGATTGAAGAAACCCTAGATTATATTCAATCCCTTCGATCTCAAGTTCAAGTAATGCGCTGTCTTCTCTCTACCTCCCACCTCATGAAATGTTCCTAA 594 0.4343 MQNPRSEKLEFLQKWMEGMGKCTSLKKNMSLLERKKAIKVSADLAMASTRTESKCWSRALIANIASRDHNSKLLTEHIIGSSQCFRLRKAFTSPPPSPSSSSLLKNKKMLDRSRTKIMKRRRRTIRCRVKKIVMADSIARKLVQKRTQMLKKLVPGGDLMDDDVSLIEETLDYIQSLRSQVQVMRCLLSTSHLMKCS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1071 197 CDD bHLH_AtIBH1_like 143 188 IPR044549 GO:0006355
Lele23g1071 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 185 IPR036638 GO:0046983
Lele23g1071 197 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 189 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1071 Lele-ChrLele23 16282462 16283055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1071 1 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 38.974 2.14e-31 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1071 23 16282462 16283055 Lele23g1071 23 16282462 16283055 ECH
Lele21g0980 21 6868400 6868999 Lele23g1071 23 16282462 16283055 hybridization
Lele22g0991 22 6966697 6967287 Lele23g1071 23 16282462 16283055 hybridization