Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1062 ATGGCCGCCGCAGGTTCATCCTCGCCCTCTTCGGTTAACACCACTTCCGGCAATGTGAATGCTTCTTCTTCGGCGGCAGACGACGCAGCTCCTTCTGCTTCCTCTTCCATTGATTTCCTCTCTATATGTCACAGCCTAAAGACAACAAAAAGAGCAGGATGGATACGTAAAGATGTTAAGGCTCCAGAATCGATAGCGGATCATATGTATCGAATGGGTTTGATGGCTCTGATTGCTTCAGATATCTCTGGCATAGACCGAAACAAGTGTATAAAAATGGCTATTGTTCACGATATTGCTGAAGCTATTGTTGGGGACATTACCCCATCAGACGGTGTTTCAAAAGAAGAAAAGAGTAGACGAGAACTAGAAGCACTTGATCATATGTGTAAAGTGCTAGGTGGAGGATCTAGAGCAACGGAAATAGCTGAGTTGTGGATGGAGTATGAAGCAAATTCTTCACCGGAAGCTAAATTTGTCAAAGACCTTGACAAGGTGGAGATGATACTTCAAGCCTTAGAATATGAAGATGGTGAGTGCTTGTTTCCTCTTTCTCTAAGTCTTTATTCACTATACTGTGTTATGGCTTCTAAAACTCTGATACGTATGTACACATATCAGCAGAAGGATTTGGATGAATTTTTTGAGTCAACTGCTGCTAGGTGGTTGAGGTTGAACTCGAACAAAGAGAGAACTGAGAAATGGTGGCTGCGCAGGAAGCATCAGGTAGAAGTGGAACTCGATTTCAATAGGATCAGAATATCATCTAACCGTATACAAGCTTCGTGTTCATCCAACTCAGAGCTTCCTTTGACATCTTTTATTACTCTTGACATTTTTTGA 843 0.4223 MAAAGSSSPSSVNTTSGNVNASSSAADDAAPSASSSIDFLSICHSLKTTKRAGWIRKDVKAPESIADHMYRMGLMALIASDISGIDRNKCIKMAIVHDIAEAIVGDITPSDGVSKEEKSRRELEALDHMCKVLGGGSRATEIAELWMEYEANSSPEAKFVKDLDKVEMILQALEYEDGECLFPLSLSLYSLYCVMASKTLIRMYTYQQKDLDEFFESTAARWLRLNSNKERTEKWWLRRKHQVEVELDFNRIRISSNRIQASCSSNSELPLTSFITLDIF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1062 280 ProSiteProfiles HD domain profile. 65 169 IPR006674 -
Lele23g1062 280 FunFam HD domain-containing protein 2 24 187 - -
Lele23g1062 280 Gene3D Hypothetical protein af1432 20 244 - -
Lele23g1062 280 MobiDBLite consensus disorder prediction 1 27 - -
Lele23g1062 280 Pfam HD domain 43 179 IPR006674 -
Lele23g1062 280 SUPERFAMILY HD-domain/PDEase-like 34 180 - -
Lele23g1062 280 PANTHER UNCHARACTERIZED 6 221 IPR039356 GO:0002953
Lele23g1062 280 SMART hd_13 61 178 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1062 Lele-ChrLele23 16197289 16201201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1062 23 16197289 16201201 Lele23g1062 23 16197289 16201201 ECH
Lele21g0990 21 6966461 6974384 Lele23g1062 23 16197289 16201201 hybridization
Lele22g1003 22 7068591 7072109 Lele23g1062 23 16197289 16201201 hybridization