Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1059 ATGCCTTTCAATTCGGTCGTTAAGCCTCTCCTCCTCCTCTTCTTGCTCTCATGTGCTGGACTTTGTTTCTCTTCCGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGCATTAAAAATGCTCTGACTGACCCGCATGGAGTTTTAAGCAACTGGGATGAGTACTCGGTGGACCCTTGCAGTTGGGCTATGATCACCTGTTCTGCAGATTCTCTTGTCATAGGCCTGGGAGCTCCTAGCCAATCTCTCTCTGGAACTCTATCGGGAGCAATCGCCAATCTGACAAATCTCCGACAAGTTTTACTGCAGAACAACAATATTTCTGGCAAAATCCCACGGGAGCTTGGTACCCTTCCTAAGCTTCAAACTCTTGATCTTTCCCATAATCGATTCTCTGGGACGATTCCAGGGTCTCTGAGTCAGTTGAATAGTCTCCAGTACCTGAGGCTGAACAACAATAGTTTGTCTGGGCCATTTCCCGTATCAGTGTCAAAAATCCCACAGCTTTCTTTCTTAGACTTGTCTTACAACAATCTCAGTGGACCATTACCCAAATCTCCAGCCAGAACATTCAACGTTGTTGGAAACCCCTTAATTTGTGGAAGCAGTTCTAGTGAAGGCTGCTCTCGATCAGCAACCCTCACACCTGTTCCTTTCACTCTAACATTGTCACCAGGAAATCACAAGTCCAAGAAGCTAGCAATTGCACTTGGAGTGAGTTTTAGTTTTGCTTGCATTATACTCCTGTCTTTTGGCATCTTATGGAACAAGAAGAGACGGCAGAGCCGAACCATCCTGTACATCAATGATTGTCAAGAAGAGGGACTTGTTAGATTGGGAAATCTTAAAAGTTTTACTTTCAGAGAGCTCCAACATGCGACGGATAATTTCAGCTCCAGGAACATACTTGGAACGGGAGGTTTTGGCAATGTTTACCGGGGGAGGCTTGGAGATGGGACAATGGTGGCGGTGAAAAGGCTGAAGGATGTAAGTGGAAGTGCTGGGGAATCACAGTTTCGAACAGAACTGGAGATGATCAGCTTGGCAGTTCACCGAAATTTACTTAGATTAATTGGATTTTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGCTGTGTGGCTTCAAGGCTCAGAGGCAAACCTTCTCTGGACTGGAACACGAGAAAGAGGATTGCCATTGGAGCCGCGAGAGGTCTTCTGTATCTTCATGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTCTTGATGACTATTTTGAGGCTGTTGTAGGTGATTTTGGGCTTGCAAAGCTCCTTGACCATGCTGACTCTCATGTCACAACCGCTGTCCGTGGCACTGTGGGCCACATTGCACCAGAATACCTCTCCACTGGCCAATCTTCGGAGAAAACCGATGTATTTGGATTTGGCATTCTCTTGTTGGAGCTTATAACTGGAATGACAGTCCTTGAGTTTGGGAAAACAGTTAATCAGAAGGGCGCTATCCTAGAGTGGGTTAAGAAAATACAACATGAAAAGAAAATTGAAGTATTGGTGGACAAAGAGCTAGGTAGTCACTATGACTGGATAGAGGTGGGGGAGATGTTGCAAGTGGCTTTACTCTGCACTCAATATTTGCCGGCCCACCGCCCTAAGATGTCTGAAGTGGTCCGGATGCTCGAAGGTGATGGCCTCGCCCAGAAATGGGCGGCATCACATAATCATGGTAGCCTCAGCATAAGCTCCTTTCACAGCAATAGTAGCAACAGTTCATCCTGTCCTACCACCACCACCGCGTCCAATTCTAAACACGATCGCTCCCACATGTTTGGCATGGCAGTGGATGATGATGATGATGGACATTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCAAGATGA 1923 0.4607 MPFNSVVKPLLLLFLLSCAGLCFSSEPRNHEVEALMSIKNALTDPHGVLSNWDEYSVDPCSWAMITCSADSLVIGLGAPSQSLSGTLSGAIANLTNLRQVLLQNNNISGKIPRELGTLPKLQTLDLSHNRFSGTIPGSLSQLNSLQYLRLNNNSLSGPFPVSVSKIPQLSFLDLSYNNLSGPLPKSPARTFNVVGNPLICGSSSSEGCSRSATLTPVPFTLTLSPGNHKSKKLAIALGVSFSFACIILLSFGILWNKKRRQSRTILYINDCQEEGLVRLGNLKSFTFRELQHATDNFSSRNILGTGGFGNVYRGRLGDGTMVAVKRLKDVSGSAGESQFRTELEMISLAVHRNLLRLIGFCATPNEKLLVYPYMSNGCVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTVLEFGKTVNQKGAILEWVKKIQHEKKIEVLVDKELGSHYDWIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAQKWAASHNHGSLSISSFHSNSSNSSSCPTTTTASNSKHDRSHMFGMAVDDDDDGHSLDSYAMELSGPR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1059 640 Gene3D Transferase(Phosphotransferase) domain 1 374 585 - -
Lele23g1059 640 SUPERFAMILY L domain-like 28 276 - -
Lele23g1059 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 577 - -
Lele23g1059 640 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 210 - -
Lele23g1059 640 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Lele23g1059 640 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Lele23g1059 640 Gene3D Ribonuclease Inhibitor 28 210 IPR032675 -
Lele23g1059 640 SMART serkin_6 297 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1059 640 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Lele23g1059 640 Pfam Leucine rich repeat 119 179 IPR001611 GO:0005515
Lele23g1059 640 MobiDBLite consensus disorder prediction 586 611 - -
Lele23g1059 640 MobiDBLite consensus disorder prediction 586 622 - -
Lele23g1059 640 FunFam Somatic embryogenesis receptor-like kinase 1 374 585 - -
Lele23g1059 640 SUPERFAMILY Protein kinase-like (PK-like) 280 567 IPR011009 -
Lele23g1059 640 FunFam Somatic embryogenesis receptor kinase 1 267 373 - -
Lele23g1059 640 PRINTS Leucine-rich repeat signature 166 179 - -
Lele23g1059 640 PRINTS Leucine-rich repeat signature 121 134 - -
Lele23g1059 640 Gene3D Phosphorylase Kinase; domain 1 267 373 - -
Lele23g1059 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Lele23g1059 640 ProSiteProfiles Protein kinase domain profile. 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1059 640 Pfam Protein kinase domain 299 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1059 Lele-ChrLele23 16177977 16182046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1059 10 512 Receptor kinase-like Gene Family AT2G23950 75.746 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele23g1059 Pkinase 5.9e-41 CL0016