Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1056 ATGTTCATGCTGTGTTTCTTCCTGAACACAGCATATTCAGACAAGAACGTGAGTGATGTCGGATTCATGTTTGATGGATACTTCAAATTGGGAGCAGTAAATGATCAAGAACTCAAAGATTCCAACATGTCAGCAAATGTAATATATGCCGATAGTGGTCTAAGTAAAGCAGATCAAGTCTTTTACAATCTTCCTCTTCAGTTCAAGAATTCCAATACTACTGCTACACCTTCTTCTATCTTCTCTTTCTCCTCCACTTTCATCTTCGCCGTCGTAGCCACCGATCCTGAATTTGACGGCCACGGACTCGCCTTTGCTATCTCTCCTACTCGAGGTATACCTCAAGCTCAGCCAAACCAATATCTTGGACTATTCAATGCCACCTCCAATGGTGAAAGTTCCAATCATATTGTGGCAATTGAGCTTGACACCGACAAGGATTTTCAGTTTCGTGATATTGATGATAACCATCTTGGTATTGATATCAATGGGTTGGAATCTGTCAATTCTACCCCTGCAGGTTACTATACTGATCCAGGTCGTTTCAGAAAGCTAGATCTTACAAGTGGAGAACCGATGCAGGTTTGGGTTGAATATAATGGTACTGATCAGAAACTCAGTGTCACCGTTCATCCAATAAACATTCCTAAACCTGAGATTCCTCTTCTCACACTGAAAAGAGATCTTTCTTCTTATTTCTTTGAGTTTATGTATGTTGGATTCTCATCCTCTAGTGGCTCAAATTCATCTCATTACATATTGGGTTGGAGTTTCAGGATGAATGGTCAAGCTGAGCAGATTAAACTTTCTCGCCTTCCTGATATTCCTGGACTTTTAGATCCAAATGAAAGTGGTGGAGGAGGGAAAGGAAACAAGAAAATATTGATAGTAATTATATTATCACTAGTGAGTGCGGTTTTCCTTGTAATCTTGATTATTTATAGTGTGATTATGATTGCAAGGAGGAGGAAATTCATTCAAGTTGTTGAAGATTGGCAAGTCTTGTATGGTCCTCATAGGTTCACTTACAGGGACTTATTCATTGCAACCAAAGGGTTTAGAGAGGGACAACTCCTTGGAAGAGGAGGTTTTGGAAGAGTATACAAAGGAATTCTATCATTTTCTAACGTTCAGATTGCGGTGAAAAAGATTTCTCATGATTCAAGACAAGGAATGAAAGAATTCGTCGCAGAAATCGCAACTATCGGCCGTCTCAGGCATCCAAACTTGGTTGCTTGTGGAAGAAGGCCTGTGGAACCTCAGACTTCGCCGGAGAAAGTGCTGATCTTAGAATGGGTTATAGAGTGCTGGCAAAGAGGAGACATTTGTGAAGCAGTGGATAGCAGATTGGGAGATGAATATGTGGTGGATGAAGCTGAATTGGTGCTTACACTTGGCTTGCTTTGTTCACATCCTATATCATCAGCAAGGCCCACTATTTCAAGCATTGTGCAGTTTTTAGGTGGAGATTCTCAGTTGCCTGATAACTTGTTGGATTTAATCAAGCCTAGATATTTCAGTAGCCGGTTTGGTCAAGCATTTTCCTGTTTATCCTCTAATAATTGTCAAACTTCTATTGCTTCTTTGACTTTTACAGAACCATTTACTTCATCCGGCCGCTAA 1623 0.4042 MFMLCFFLNTAYSDKNVSDVGFMFDGYFKLGAVNDQELKDSNMSANVIYADSGLSKADQVFYNLPLQFKNSNTTATPSSIFSFSSTFIFAVVATDPEFDGHGLAFAISPTRGIPQAQPNQYLGLFNATSNGESSNHIVAIELDTDKDFQFRDIDDNHLGIDINGLESVNSTPAGYYTDPGRFRKLDLTSGEPMQVWVEYNGTDQKLSVTVHPINIPKPEIPLLTLKRDLSSYFFEFMYVGFSSSSGSNSSHYILGWSFRMNGQAEQIKLSRLPDIPGLLDPNESGGGGKGNKKILIVIILSLVSAVFLVILIIYSVIMIARRRKFIQVVEDWQVLYGPHRFTYRDLFIATKGFREGQLLGRGGFGRVYKGILSFSNVQIAVKKISHDSRQGMKEFVAEIATIGRLRHPNLVACGRRPVEPQTSPEKVLILEWVIECWQRGDICEAVDSRLGDEYVVDEAELVLTLGLLCSHPISSARPTISSIVQFLGGDSQLPDNLLDLIKPRYFSSRFGQAFSCLSSNNCQTSIASLTFTEPFTSSGR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1056 540 SUPERFAMILY Protein kinase-like (PK-like) 332 413 IPR011009 -
Lele23g1056 540 Pfam Protein kinase domain 354 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1056 540 Gene3D Transferase(Phosphotransferase) domain 1 413 500 - -
Lele23g1056 540 ProSiteProfiles Protein kinase domain profile. 353 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1056 540 PANTHER - 411 491 - -
Lele23g1056 540 CDD lectin_legume_LecRK_Arcelin_ConA 51 262 IPR001220 GO:0030246
Lele23g1056 540 FunFam L-type lectin-domain containing receptor kinase V.9 20 263 - -
Lele23g1056 540 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Lele23g1056 540 Gene3D - 32 273 - -
Lele23g1056 540 SUPERFAMILY Concanavalin A-like lectins/glucanases 54 264 IPR013320 -
Lele23g1056 540 ProSitePatterns Protein kinases ATP-binding region signature. 359 383 IPR017441 GO:0005524
Lele23g1056 540 Pfam Legume lectin domain 55 272 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1056 Lele-ChrLele23 16157647 16160023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1056 411 540 Receptor kinase-like Gene Family AT4G29050 45.588 1.88e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele23g1056 Lectin_legB 3e-63 CL0004