Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1052 ATGGCGAAACTATCACAACACAAGAACAATGCCAGCAACAATAAACTTATCAACAACAACAACCCCCTTGGCGTCACAAACACTAGTGTTCCCTCCAAGGTCAAACGAACAAGAAGAAGTGTCCCCAGAGACTCTCCTCCTCAACGTAGCTCTATATACCGAGGAGTCACTAGGCACCGCTGGACTGGCCGGTATGAAGCTCACTTGTGGGACAAGAATTGTTGGAACGAATCGCAGAACAAGAAAGGGAGACAAGGGGCCTATGACGATGAAGAAGCAGCAGCACATGCTTATGATTTAGCAGCATTGAAGTACTGGGGTCAAGATACAATCCTTAACTTTCCGTTTGCAACGTACCAGAACGAACTGAAAGAAATGGAGGGTCAATCAAGGGAAGGGTATATTGGATCGTTAAGGAGGAAAAGCAGCGGTTTTTCCAGGGGAGTTTCTAAATACAGAGGCGTTGCCAGACATCATCACAATGGAAGATGGGAAGCTCGTATTGGCAGAGTTTTTGGCAACAAATATCTCTATCTTGGTACTTATGCTACTCAAGAAGAAGCTGCCGCCGCTTATGATATGGCGGCTATAGAATACCGTGGGCTTAACGCCGTCACCAACTTCGATCTCAGCCGTTATATCAAGTGGCTTAAGCCTAATTCCAACGCCAACAATACTATAGATCTTACTACTGATCAATCTATCTGTGACCCTAATGGTAATGTTACCACCACCTTAACAACATCAAACCCTGCTACTGCTCAAGAGCATAGATTCAGCTTCTTCCACAACCATCAGCTTCAGGAATCCTTCGACGTTAATGGTGGAGAAGAAGCCATGCTGACTCAGCCTGGTCAGCCGGCGACAACTGCCACATCAGCCCTAGGGCTGCTGCTTCATTCGTCCAAGTTCAAGGAAATGATGGAGATGACGTCCACCACCGCGGATTTGCCTGCGCCGGCGGCACCGGAGTCTGAGATGCTGCCGCAGTACAGGTTTCCGGATGATATTCAGACGTACTTTGAGTGTGAAGACTCTAACAGTAATGGGGAAGGGGATGATCATATCATGTTCAGCGAGCTCAACTCCTTCGTTCCTCCTCTGTTTCACTGTGATGACTTTGAAGCCTGA 1131 0.4739 MAKLSQHKNNASNNKLINNNNPLGVTNTSVPSKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQDTILNFPFATYQNELKEMEGQSREGYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNSNANNTIDLTTDQSICDPNGNVTTTLTTSNPATAQEHRFSFFHNHQLQESFDVNGGEEAMLTQPGQPATTATSALGLLLHSSKFKEMMEMTSTTADLPAPAAPESEMLPQYRFPDDIQTYFECEDSNSNGEGDDHIMFSELNSFVPPLFHCDDFEA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1052 376 FunFam AP2-like ethylene-responsive transcription factor 150 211 - -
Lele23g1052 376 MobiDBLite consensus disorder prediction 1 35 - -
Lele23g1052 376 FunFam AP2-like ethylene-responsive transcription factor 51 117 - -
Lele23g1052 376 SMART rav1_2 52 121 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 SMART rav1_2 151 215 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 CDD AP2 150 211 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 SUPERFAMILY DNA-binding domain 51 116 IPR016177 GO:0003677
Lele23g1052 376 MobiDBLite consensus disorder prediction 1 55 - -
Lele23g1052 376 SUPERFAMILY DNA-binding domain 150 211 IPR016177 GO:0003677
Lele23g1052 376 Gene3D AP2/ERF domain 52 117 IPR036955 GO:0003700|GO:0006355
Lele23g1052 376 Gene3D AP2/ERF domain 150 211 IPR036955 GO:0003700|GO:0006355
Lele23g1052 376 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 21 274 - -
Lele23g1052 376 Pfam AP2 domain 150 201 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 Pfam AP2 domain 52 107 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 ProSiteProfiles AP2/ERF domain profile. 151 209 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 ProSiteProfiles AP2/ERF domain profile. 52 115 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 PRINTS Ethylene responsive element binding protein signature 191 211 IPR001471 GO:0003700|GO:0006355
Lele23g1052 376 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1052 Lele-ChrLele23 16101697 16104105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1052 21 263 AP2-EREBP Transcription Factor Family AT5G57390 55.039 1.41e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele23g1052 AP2 3.8e-09 CL0081