Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1043 ATGGGTTTGTGTAGATTTTCCTTGTTTGCGTTTTTCTCTGTGGTCGTTGTTCATTTAGGAGTTCATGGGGAAGCAAATGCCGACCTGGTGTTTGATAAAAGTTCTCTGATATCATTCATGAGAGGCATTGTTTCTGACCCAAAGAACGCTCTAGCGAGCTGGGAATCTCCTGACATTCATGTCTGTAATTGGTCAGGGATAAGATGCAACAATGCAAGTGACAGAAGAGTCATAGAGATTGATCTCAATGGAAAATCACTAGGAGGCATAATTTCCCCTTCTATTTCCAACCTCACTTCCTTGAAAATTCTTGATCTTTCTGAGAATTTCTTTGTGGGTCACATTCCGAATGAGTTAGGCTTCTTAACTCAACTGGGGCAACTCAGTTTATGTTGGAATTTGCTTCAAGGAGAAATTCCAACTGAATTGGGTTCACTTCATAACTTATATTACCTTGACATGGGAAGCAACCAGCTTGAAGGTGAGATTCCAGAATCACTTTTCTGTAATGGATCTTCTTCCTCATTGAGGTATATAGATCTCTCCAACAATTCCTTAATGGGACATATCCCATTGAACAATGAGTGCATGCTTCTAGAAGTTAGGTTCCTCTTACTTTGGTCTAATAAGCTTGTAGGCCAAATTCCTCAAGTTCTTTCTAACTCCACACAGCTAAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGTGAATTACCATATGAGATTGTTAGTTGGCCTGAACTACAACTCCTTTATTTGTCTGATAATGACTTTTTGAACCATGATGGAAACACCAACCTTGAACCTTTCTTTGATTCTTTGAGAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGGGATCTTCCTAAAAGCCTTGTTCAGCTTCATCTTGATAAAAATCTCATTTATGGCCCCATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTTTACTGAATTTTTCTAGTAATCTGCTGAATGGATCTATTCCTTCTAGCCTATGGAAGATGGGAAAGCTTGAGAGAATCTATTTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGAACTTGGTGGCATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTGTACGAAAACCGGCTTTCTGGAAAGATCCCGCCGAGTCTTGGAAAATGCGTCAATTTGGAGATTTTGGACCTATCTAGGAACAGAATTTCCGGGGTGATTCCTACGGAAGTCGCCGCCTTAACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATTTATCCAACAACAATCTCTCAGGCAGAATCCCACCTCAGCTTGAAAGCTGCATAGCTCTAGAATACCTTAACCTTTCTGGTAACTCCTTAGAGGGCCCTCTCCCTTTTCCATTAGGCCAATTGCCTTATATAAAGTCACTTGATGTCTCTTCAAATAGGTTAATTGGGCCAATACCAGAGTCCTTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTTAACAATTTCTCAGGGAATATACCAAACAAGGGAGCAATTTCATCTCTCACCATAGACTCTTTCCTAGGAAATGATGCTCTATGTGGTTCCATAAAAAGGATGAAAAGTTGCCACAAGAAACAGAGTTATCATTTTGTTCTCCTTATAATTCCTGTGTTTCTATTTGCCACTCCCCTCTTGTGCATGTTCGGCTACCGATTGGCACACATGGTGAAATCTCGAAGGCAATTGGCCATATTTGGCAGAAATGACTGTGAGAGCGATGAAGAGGAAACGAAGGAGCTAAAGTACCCAAGCATTTCATATAAAAAACTTATTGAAGCCACTGGAGGATTCAGTGCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTTTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGATAGATACTGCCACAGCGGGTGAATTGTCAGGGAGTTTTAGAAGAGAGTTTCAAATTTTGAGAAGAACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAAAGTTTAAGGCTCTTGTTCTTCCTCTAATGCCAAATGGAAGCCTTGAGAGGCACCTATATCCAAGCCATGGGTTGAGCCAAAGATTGAATTTAGTGCAGTTAGTGAGGATATGCAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGCGATCTCAAGCCGAGCAATATACTTCTCGATGACGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTCGTGAAAGGCGATGAGAGTATGGCCTCGAATAATAGTAGCTCGGCATCTTTCAGTTCAACACATGGCTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACACAAGGTGATGTGTACAGTTATGGAGTATTACTACTAGAAATAGTGACAGGTAGGCCTCCAACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAGTACCCATACAAGCTTAACAACGTTGTTGAGAAGACATTGCAAAGGTTGTCACATTCACATTCTGCGCAACAACAATATGACAGCAGCAAAATCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGGCTTCTCTGCACTCAGTATAATCCTCTGACAAGGCCAAGCATGATGGATGTAGCTCAAGAAATAGGAATGTTGAAGGACTATTTGTGTAATCCATCTTCCTATGATGAAGCAGTTAACTCTAAGGTGGATGATTCCTTTTGTAGTGAAGATAATTTACTTGAAAAGTAA 2991 0.4059 MGLCRFSLFAFFSVVVVHLGVHGEANADLVFDKSSLISFMRGIVSDPKNALASWESPDIHVCNWSGIRCNNASDRRVIEIDLNGKSLGGIISPSISNLTSLKILDLSENFFVGHIPNELGFLTQLGQLSLCWNLLQGEIPTELGSLHNLYYLDMGSNQLEGEIPESLFCNGSSSSLRYIDLSNNSLMGHIPLNNECMLLEVRFLLLWSNKLVGQIPQVLSNSTQLKWLDLESNMLSGELPYEIVSWPELQLLYLSDNDFLNHDGNTNLEPFFDSLRNLSNLQELELAENNLGGKLPSNIGDLPKSLVQLHLDKNLIYGPIPPQISNLVNLTLLNFSSNLLNGSIPSSLWKMGKLERIYLSNNSLSGEIPSELGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENRLSGKIPPSLGKCVNLEILDLSRNRISGVIPTEVAALTSLKLYLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGRIPPQLESCIALEYLNLSGNSLEGPLPFPLGQLPYIKSLDVSSNRLIGPIPESFLLSSTLKKLNFSFNNFSGNIPNKGAISSLTIDSFLGNDALCGSIKRMKSCHKKQSYHFVLLIIPVFLFATPLLCMFGYRLAHMVKSRRQLAIFGRNDCESDEEETKELKYPSISYKKLIEATGGFSASSLIGSGRFGHVYKGVLRDNTRIAVKVIDTATAGELSGSFRREFQILRRTRHRNLIRIITICSKPKFKALVLPLMPNGSLERHLYPSHGLSQRLNLVQLVRICSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGISRLVKGDESMASNNSSSASFSSTHGLLCGSVGYIAPEYGMGKKASTQGDVYSYGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLNNVVEKTLQRLSHSHSAQQQYDSSKIWQDVVLELIELGLLCTQYNPLTRPSMMDVAQEIGMLKDYLCNPSSYDEAVNSKVDDSFCSEDNLLEK 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1043 996 Gene3D Phosphorylase Kinase; domain 1 632 741 - -
Lele23g1043 996 Gene3D Ribonuclease Inhibitor 369 472 IPR032675 -
Lele23g1043 996 SMART LRR_typ_2 146 170 IPR003591 -
Lele23g1043 996 SMART LRR_typ_2 399 423 IPR003591 -
Lele23g1043 996 SMART LRR_typ_2 375 398 IPR003591 -
Lele23g1043 996 SMART LRR_typ_2 98 122 IPR003591 -
Lele23g1043 996 SMART LRR_typ_2 278 302 IPR003591 -
Lele23g1043 996 SMART LRR_typ_2 327 351 IPR003591 -
Lele23g1043 996 Gene3D Ribonuclease Inhibitor 473 584 IPR032675 -
Lele23g1043 996 SUPERFAMILY RNI-like 79 365 - -
Lele23g1043 996 SUPERFAMILY Protein kinase-like (PK-like) 646 960 IPR011009 -
Lele23g1043 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Lele23g1043 996 Gene3D Ribonuclease Inhibitor 265 368 IPR032675 -
Lele23g1043 996 Gene3D Ribonuclease Inhibitor 31 196 IPR032675 -
Lele23g1043 996 Pfam Protein kinase domain 668 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1043 996 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 381 962 - -
Lele23g1043 996 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 743 974 - -
Lele23g1043 996 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lele23g1043 996 Gene3D Ribonuclease Inhibitor 197 264 IPR032675 -
Lele23g1043 996 Gene3D Transferase(Phosphotransferase) domain 1 743 982 - -
Lele23g1043 996 SMART serkin_6 666 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1043 996 FunFam Leucine-rich repeat receptor-like protein kinase 30 192 - -
Lele23g1043 996 FunFam Leucine-rich repeat receptor-like protein kinase TDR 275 593 - -
Lele23g1043 996 ProSiteProfiles Protein kinase domain profile. 666 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1043 996 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lele23g1043 996 CDD STKc_IRAK 672 962 - -
Lele23g1043 996 SUPERFAMILY L domain-like 333 583 - -
Lele23g1043 996 Pfam Leucine Rich Repeat 353 372 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1043 Lele-ChrLele23 16032120 16035824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1043 32 973 Receptor kinase-like Gene Family AT3G47570 33.977 2.80e-155 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele23g1043 Pkinase 8.7e-45 CL0016