Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1036 ATGGAAGCCAGCGCTGGACTCGTTGCTGGGTCTCACAACCGCAACGAGCTCGTCGTCATTCACGGCCATGAAGAGCCGAAACCTTTGAAGAATTTGGATGGCCAGGTCTGTGAGATATGTGGCGACGATGCCGGACTCACCGTCGACGGCGACCTGTTTGTCGCCTGCAATGAGTGTGGTTTCCCGGTTTGCCGTCCCTGCTATGAATATGAACGAAGAGAAGGAAGCCAACTCTGCCCACAATGCAAGACCAGATACAAGCGTCTCAAAGGAAGCCCGAGGGTGCAGGGAGATGAAGATGAGGAGGACGTGGATGACATTGAACATGAATTCAAAATCGCAGCAGACGACAAGACCAAGGGTAACCATATGGCAGAGGCCATGCTGCATGGCAAGATGACCTATGGAAGAGGCCCTGAAGATGACGATAATGTTCAATTCCCTCCCGTCATTTCCGGAAACCGCTCCCGTCCGGTGAGCGGAGAATTCCCAATAACATCCCATGCTTATGGTGGAGACCAGATGCTATCTTCTAATTCTCTTCACAAACGCATTCATCCTTATCCAGTTCCTGAGCCTGGAAGTGTGAGAGGGGACGAGAAGAACGAGGATGGGTGGAAAGATAGAATGGATGACTGGAAACTGCAGCAAGGAAACCTAGGGCCTGAACCTGAGGAAGATCTAGAGGCAGCTTTGTTGGATGAAGCGAGGCAACCATTGTCGAGAAAAGTGCCAATAGCATCGAGCAAGATTAATCCATATAGAATGGTGATAGTGGGACGTCTTGTGATTCTTGCATTCTTCCTGAGATATAGAATTATGAATCCGGTTCATGACGCCATAGGGCTGTGGCTCACCTCCATTATATGTGAAATCTGGTTTGCTTTCTCTTGGATCCTTGATCAGTTCCCTAAATGGTTCCCCATTGATCGCGAGACCTACCTTGATCGTCTTTCCATCAGGTATGAAAGAGAAGGAGAGCCAAATATGCTGGCATCGGTGGATGTGTTTGTCAGTACGGTGGATCCGATGAAGGAACCACCGTTGGTGACGTCGAACACGATTCTGTCGATATTGGCGATGGATTATCCGGTGGATAAGATATCATGTTACATATCAGACGATGGAGCTTCAATGTGCACGTTCGAAGCACTTTCAGAAACAGCAGAATTTGCAAGGAAGTGGGTGCCATTTTGTAAGAAGTTCAGCATTGAGCCTCGAGCTCCTGAGATGTACTTCTCTGAGAAGATCGATTACTTGAAAGATAAGGTTCAGCCCACTTTCGTCAAGGAGCGTCGAGCAATGAAGAGAGAATACGAAGAGTTCAAGGTGAGAGTGAATGCACTTGTGGCGAAAGCCCAGAAGGTTCCAGCAGGAGGATGGATTATGCAGGATGGCACTCCATGGCCAGGCAACAACACCAAGGACCATCCTGGTATGATCCAAGTCTTTCTCGGTCACAGTGGCGGCTGCGACACCGACGGCAACCTTCTTCCCCGTCTCGTTTATGTCTCCAGAGAGAAACGCCCTGGTTTCGCCCACCACAAGAAAGCTGGCGCCATGAATGCTCTCGTTCGTGTCTCTGCTGTTCTCACAAATGCCCCTTTCATGCTCAACTTGGATTGTGATCACTACCTTAATAACAGCAAGGCCGTCAGAGAGGCCATGTGCTTCTTGATGGATCCCCAAACTGGGAAAAAAGTCTGCTATGTCCAATTCCCTCAGAGATTCGATGGCATTGACAGGCACGATCGTTACGCCAACAGAAACACCGTATTCTTCGACATTAACATGAAGGGTCTAGATGGTATTCAAGGTCCTGTGTATGTGGGGACTGGGTGTGTGTTTAGGAGGCAAGCTCTGTACGGATACAATCCTCCGAAGGGTCCTAAACGCCCCAAGATGGTAAGTTGTGATTGCTGCCCGTGTTTCGGACGCCGCAAGAAGCAGAAGCATGAGCATCTTGCAAATGCAGAGTCTGCAATGCTGCAACAAGGAATGGAAGATGATAAAGAGTTGCTCATGTCTCAGATGAATTTTGAAAAGAAATTTGGGCAATCATCTATTTTTGTGACTTCAACTTTGATGGAAGAAGGTGGTGTGCCTCCTTCCTCAAGCCCAGCAGCTCTTCTCAAAGAAGCCATTCATGTTATAAGCTGTGGCTATGAGGATAAAACCGAATGGGGAACTGAGCTGGGTTGGATCTATGGATCTATTACTGAGGATATCCTAACAGGTTTCAAGATGCATTGCCGTGGATGGAGATCTATTTACTGTATGCCAAAGATACCTGCATTCAAGGGTACAGCTCCAATCAACTTGTCAGATCGGCTCAACCAGGTACTTCGTTGGGCTCTTGGTTCGATTGAGATATTCTTCAGTCCCCATTGCCCTGCATGGTATGGCTACAAGGGTGGCAACAAGCTCAAGTGGCTCGAGCGATTCGCCTATGTCAACACCACCGTCTACCCCTTCACCTCCCTCCCTCTACTTGCCTACTGTATTCTTCCTGCTATTTGCTTGCTCACTGACAAGTTCATCATGCCACCGATAAGCACTTTTGCTGGTTTGTACTTCGTTGCTTTGTTCTCTTCCATCATCGCGACGGGCCTGCTTGAGTTGAAATGGAGTGGAGTAAGCATAGAGGAATGGTGGAGAAATGAGCAATTCTGGGTCATTGGTGGTGTATCAGCACATCTATTTGCTGTCATACAAGGTCTTCTGAAGGTGCTAGCCGGGATCGACACAAACTTCACCGTTACATCGAAGGCAGCAGATGATGAGGAATTTGGAGAATTATACACATTCAAATGGACCACTCTCCTAATCCCACCAACCACTATACTAATCATCAATATTGTTGGTGTTGTTGCTGGAATCTCAGATGCAATTAACAATGGCTACCAATCTTGGGGACCCCTATTTGGAAAGCTCTTCTTTTCCTTCTGGGTCATTGTTCATCTCTACCCATTCCTTAAAGCTATAAATGTCAACCCCAACCTCAGTCATCCATATTTGCTCTGCCCTCCTCATTCACCACCACCCACCATGGAAGCTAGCACTGGACTTTTTGCAGGGTCTCACAACAACAACGAGCTTGTGGTCATACAAGGACACGAAGAAGAGCATAAGCCAGTGAAGAACTTAGATGGTCAGCTATGTGAGATATGTGGGGATTCTGTGGGGTATACAGTGGATGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTGTGCAGGCCATGTTATGAGTATGAAAGGAGGGAAGGGACTCAAGTTTGCCCTCAGTGCCAGACCAGATACAAGCGAATCAAAGGAAGCCCAAGAGTTGAGGGAGATGAAGATGAAGATGACGGGGATGATATTGAGCATGAGTTCAAAATGGAAGAAGAAAAGTATAAGCTCATGATAGGCCGTGGAGAAGATGACGATAATGCTAAATTACCAGTAGTAATAGCCAAGGTTAGTCTTATACAGTCTATGCTTGATACAAGGAAATTAAAGGTGAATGGAGAGATGCCCATTATTGAAGAACCTGGAAATGGGAAGCTGGATGAAAAGACAGAGATAACAGATGACTGGAAGATGAATCAAGGAAATCTGTGGCCTGAAACTGATGCATCAGTTGACCCTGAAAAGGCCATGAGAGACGAAGCTAGACAACCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTCACAGCTCGGCTTCTGATTCTACTATTGTTCCTTCAGTACAGAGTCATACACCCAGTTCCTGACGCGGTTGGACTCTGGCTAACATCTGTAATATGTGAAATATGGCTTACATTGTCGTGGATAATTGATCAGATTCCGAAATGGTTTCCCATTGACCGGGAGACATACCTTGATAGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTCCTCCAATAGATGTCTTTGTCACTACTGTCGATCCAATTAAGGAACCTCCACTAGTTACAGCTAATACTGTTCTTTCAATCCTGGCCATGGATTACCCTGCTAGTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTCACCTTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTACCCTTCTGCAAAAAATATACTATAGAGCCCCGAGCCCCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCGACTTATGTCAGAGACCGCCGTACTATGAAGAGAGAATATGAAGAATTCAAGGTCAGGATAAATGCACTTGTAGCTAAATCCATAAGAGTTCCCCAAGAAGGGTGGACTATGCAAGATGGGACACCATGGCCAGGAAACAATACCAATGATCACCCAGGTATGATACAAATTCTTCTTGCTCGGAGTGGAGGCGTTCAAGGAAATGAACTTCCCTGTCTTGTCTACCTGTCTCGTGAGAAAAGGCCAGGGTTTCAACACCACAGCAAAGCTGGAGCCTTGAATGCATTGCTTCGGGTATCTGCATTGCTAAGCAATGCTTCTTTTGTGTTGAACTTGGATTGCAATCACTATGTGAACAATAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCATGGACCTACAAGTTGGAAAGGCCATTTGCTTTGTCCAGTTCCCGCTAAGATTTGACAGCCTTGATAAGCATGATCGTTATGCCAACAGAAATACTGTTTTATTTGATATAAACTTGAGATGCCTAGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGTATCTTCCGGAGGAAAGCTTTAAATGGCAGTGAACCTCCGAAGACTTCAAAGCGCCCAAAAATGGTAGGTTGTGGCTGCTGTCCTTGTTTTGGATCACGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGATTCAACCATGACAGGAACAGATGAAGGCAAGCAGATTTTAGCATCAGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGTTTTTGTGAACTCTTCCATAATAGAAGAAGGTGGTACTCCTTCTACCTCCAATCAGGCAGCCTTGCTTAAAGAAGCCATCCATGTCATGAGTAGCAGCTATGAAGACAGAACCCTATGGGGATACGAGGTTGGTTGGAACTATGGATCTATATCATCAGATATTCTGACAAGTTTCAAAATGCACTCTCTTGGTTGGAGATCCGTGTACTGCATGCCAGAAAGACCTGCTTTTAGGGGTACTGCTCCGATCAACCTTTCAGATCGACTCAGTCAGGTGCTTAGATGGGCAGTTGGATCGCTTGAGATCCTTTTCAGCAGCCATTGCCCAATATGGTACACCTTAGGTGAAGGAAAACTTAAGGGGCTTCAAAGAATTGCCTATATCAACAGCACAGTCTACCCTTTCAGCTCAATACCCCTTCTAGTATATTGTCTCATTCCTGCCGTCTGCCTGCTCACAGACAAGTTCATCACACCATCGATAAGCACCTTGGCAAGTCTTCTCTTTATTGCACTGTTCATCACAATCTTTGCATCTAGCATTCTTGAGTTGAGATGGAGTGGAGTCACTCTTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATCGGCAGCGTCTCAACACATCTCTTTGCAATTGTGAGAAACTTTCTGAAATCTGTGTCCAAAGTTGATATTAATTTCAGCGTCGTGTCAAAAGTACCAGATGATGGGGAATTCCAAGATCTGTACACCTTTAGATGGACAGCACTGCTAATACCTCCAACCACTATCATCATCATCAACCTTGTTGGCATTGTAGCTGGGTTTACAGATGCCATAAACAGTGGTGGACATTCCTGGGGAGCATTACTTGGGAAACTCTTCTTCTCTTTCTGGGTTCTGGTCCACCTTTACCCATTCCTCAAAGGTATGATGGGTAAACAGAACCGAACACCAACCCTTGTTATCATATGGTCAGTGCTTTTGGCTTCTATCTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAAAAGGACCTGATGTTAAGCAGTGTGGAATCAGTTGCTGA 6084 0.4576 MEASAGLVAGSHNRNELVVIHGHEEPKPLKNLDGQVCEICGDDAGLTVDGDLFVACNECGFPVCRPCYEYERREGSQLCPQCKTRYKRLKGSPRVQGDEDEEDVDDIEHEFKIAADDKTKGNHMAEAMLHGKMTYGRGPEDDDNVQFPPVISGNRSRPVSGEFPITSHAYGGDQMLSSNSLHKRIHPYPVPEPGSVRGDEKNEDGWKDRMDDWKLQQGNLGPEPEEDLEAALLDEARQPLSRKVPIASSKINPYRMVIVGRLVILAFFLRYRIMNPVHDAIGLWLTSIICEIWFAFSWILDQFPKWFPIDRETYLDRLSIRYEREGEPNMLASVDVFVSTVDPMKEPPLVTSNTILSILAMDYPVDKISCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRVNALVAKAQKVPAGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGCDTDGNLLPRLVYVSREKRPGFAHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYLNNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGRRKKQKHEHLANAESAMLQQGMEDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKIPAFKGTAPINLSDRLNQVLRWALGSIEIFFSPHCPAWYGYKGGNKLKWLERFAYVNTTVYPFTSLPLLAYCILPAICLLTDKFIMPPISTFAGLYFVALFSSIIATGLLELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKAADDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKAINVNPNLSHPYLLCPPHSPPPTMEASTGLFAGSHNNNELVVIQGHEEEHKPVKNLDGQLCEICGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDGDDIEHEFKMEEEKYKLMIGRGEDDDNAKLPVVIAKVSLIQSMLDTRKLKVNGEMPIIEEPGNGKLDEKTEITDDWKMNQGNLWPETDASVDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVTARLLILLLFLQYRVIHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPASKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYTIEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKSIRVPQEGWTMQDGTPWPGNNTNDHPGMIQILLARSGGVQGNELPCLVYLSREKRPGFQHHSKAGALNALLRVSALLSNASFVLNLDCNHYVNNSKAVREAMCFFMDLQVGKAICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSEPPKTSKRPKMVGCGCCPCFGSRKKLQVHSKHDDGNEDDSTMTGTDEGKQILASEMNFENKFGKSAVFVNSSIIEEGGTPSTSNQAALLKEAIHVMSSSYEDRTLWGYEVGWNYGSISSDILTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWAVGSLEILFSSHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLLVYCLIPAVCLLTDKFITPSISTLASLLFIALFITIFASSILELRWSGVTLEEWWRNEQFWVIGSVSTHLFAIVRNFLKSVSKVDINFSVVSKVPDDGEFQDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 2027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1036 2027 SUPERFAMILY Nucleotide-diphospho-sugar transferases 348 823 IPR029044 -
Lele23g1036 2027 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 109 IPR013083 -
Lele23g1036 2027 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1037 1126 IPR013083 -
Lele23g1036 2027 SMART ring_2 1054 1099 IPR001841 -
Lele23g1036 2027 SMART ring_2 37 82 IPR001841 -
Lele23g1036 2027 SMART PHD_3 1053 1100 IPR001965 -
Lele23g1036 2027 SMART PHD_3 36 83 IPR001965 -
Lele23g1036 2027 Coils Coil 432 452 - -
Lele23g1036 2027 FunFam Cellulose synthase 19 110 - -
Lele23g1036 2027 Pfam Zinc-binding RING-finger 1044 1120 IPR027934 -
Lele23g1036 2027 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Lele23g1036 2027 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Lele23g1036 2027 CDD mRING-HC-C4C4_CesA_plant 1052 1102 - -
Lele23g1036 2027 FunFam Cellulose synthase 451 625 - -
Lele23g1036 2027 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1331 1845 IPR029044 -
Lele23g1036 2027 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1222 1994 - -
Lele23g1036 2027 FunFam Cellulose synthase 1036 1127 - -
Lele23g1036 2027 ProSiteProfiles Zinc finger RING-type profile. 1054 1100 IPR001841 -
Lele23g1036 2027 MobiDBLite consensus disorder prediction 187 206 - -
Lele23g1036 2027 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Lele23g1036 2027 Pfam Cellulose synthase 334 995 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele23g1036 2027 Pfam Cellulose synthase 1319 2021 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele23g1036 2027 SUPERFAMILY RING/U-box 1038 1122 - -
Lele23g1036 2027 Coils Coil 1417 1437 - -
Lele23g1036 2027 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1456 1608 IPR029044 -
Lele23g1036 2027 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1308 1410 IPR029044 -
Lele23g1036 2027 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 495 625 IPR029044 -
Lele23g1036 2027 SUPERFAMILY RING/U-box 21 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1036 Lele-ChrLele23 15972015 15984710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1036 1 995 Cell Wall Biosynthesis AT5G17420 83.751 0.0 1719