Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1034 ATGCAGCAAGGTGATCAAACGGTGATAAGCTTGAGGCCTGGTGGTGGTCGAGGCGGTGGCGGCGGAAGCAGGCTATTCGGTCCTCGATACGAGTCCTCGTCTTCCACATCTTCTTTCCCTGCTTTCGGGTCCTTTTCTTCTGATCTCCCAGTCTTGCGCCCCCATGGCGGTGCTTCATCATCATTCTCGATTAAGGCTGGTGATTCACGGTTCGAAGGTCATGAGCTGGTGCGATACACCAGAGATCAACTGTTACAGCTTAGAGAGGCTGTTGAGGTCCCTGATGATATTATAAAAATCAAACAAGATATAGAAGCTGAGCTTTTTGGTGAAGCTCAAAGCTGGATTCGTGTGGAAAGCAATCCCCCACAGCCAGATAACCGTGACTGGCATGGCCGGTCTGGACAACTTTCTCCTGCCGAAGAAAGATCTTGGAACAATATAAGGGAAAATAGAGAATTTGGCAATCGATATGACTCAAGACAGCCCGATGCCAGCCAGATTAATCGCCAAGACCAACAGGGTTTGCAGTTTGCTAAGGGAGGACCTGCTCCTACTCTAGTGAAGGCTGAAGTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCTGAGAAGGATCGTGTGTTGAAGACAGTGAAAGGGATTCTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAATTGATTGATTCTGGCATTACATCAGTTGACATCTTGAAGGATGTCATTTCGCTTATATTTGAAAAGGCGGTGATTGAACCAACATTTTGCCCCATGTATGCTCTTCTGTGTTATGATCTTAATGAGAAGTTGCCACCATTCCCTTCTGAAGAACCTGGTGGCAAAGAGATCACTTTTAAGAGAGTGCTCTTAAATTACTGCCAGGAGGCCTTTGAAGGTGCTGATAAATTGAGGGAAGAAGTTAGGCAGATGACTGCCCCTGAACGGGAGATGGAGCGCCGTGAGAAGGAAAGACTGGTCAAGCTTCGTACTTTGGGAAACATTCGATTAATTGGGGAGCTCTTAAAGCAGAAGATGGTTCCTGAAAAAATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCACCTGATACCAAGGCCTGTCCTGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGCAAGCAACTTGATGAAAGCCCAAAATCACGGCGTATAAATGATGTGTACTTTAGCCTATTGAAAGAATTGAGCGCTAATCCTCAACTTGTACCGCGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTGCGTGTGAATAACTGGGTTCCAAGGCGTGAAGAGATAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAAAATCTTGGATTGCGCCCAGGTGCCACTGCAAACATTAGAAATCCCCGTAATGGGCAAGGAAACGCCACTTCTGGAGGATTCCCCATTGCTCGACCTGGTACTGGCGGTATGATGCCTGGAATGCCAGGGACCAGGAAGGTTCCTGGGATGCCTGGAATTGATAATGACAATTGGGAGATCCCTAGGAATCGGTCAATGCCAAGAGGAGAGATGTCAGCTGGGCAACCAACTGCACATGGCCAGTCTCTAATTTACAAGACAGCAGCCGTGAGTTCAAAGTTGCTACCTCAAGGCACTGGTGGTTTTATAAGTGGAAGTAGTAGTGCCCTAATTCATGGAGGTGGAGGTGGTGGTGGTGGTGCTCCTCCCACAATCCCATCAAACTTTGGTTCAGATGCTGAAGCTCCACCTGTTAAAGTTGCTCCTGCCATCTCCTCTGAGAAGCCACTGTCTCCTGCACCAAAAATGAGCACCGATGATCTTCAGCGCAAAACCCGGTCTCTTCTAGAAGAATATTTTAGTGTTAGGCTTTTGGATGAGGCATTACAGTGCGTGGAGGAACTAAAATCTCCAGCTTACCACCCTGAGGTTGTCAAGGAAGCCATTTCCTTGGCACTAGATAAAAGCCCACCATGTGTTGAACCTGTTGGCAATCTTCTGGAGTATCTCCTCGATAAAAGGATTCTTACTGCAAGAGACATAGGCACTGGGTCTTTGTTATTTGCTTTCATGCTCGACGATATTGGCATAGATTTACCAAAAGCTCCGAACAACTTTGGTGAGATAATCGGGAAACTGATTTTAGCTGGGGGATTGGATTTTAAGGTGGCACACGAGATTCTTAAGAAGGTGGAAGATGACCTGTTCCAGAAAGCCATATTCGATGCTGTGATACAGGTCATTGCTTCATCATCTGGGCAAGTTTTGGAGTCACAAGCATCTGATGTCGAAGCCTGCCGGAGTCTGTTGAAGTGA 2343 0.4631 MQQGDQTVISLRPGGGRGGGGGSRLFGPRYESSSSTSSFPAFGSFSSDLPVLRPHGGASSSFSIKAGDSRFEGHELVRYTRDQLLQLREAVEVPDDIIKIKQDIEAELFGEAQSWIRVESNPPQPDNRDWHGRSGQLSPAEERSWNNIRENREFGNRYDSRQPDASQINRQDQQGLQFAKGGPAPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSVDILKDVISLIFEKAVIEPTFCPMYALLCYDLNEKLPPFPSEEPGGKEITFKRVLLNYCQEAFEGADKLREEVRQMTAPEREMERREKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDTKACPVEENVEAICQFFNTIGKQLDESPKSRRINDVYFSLLKELSANPQLVPRLRFMIRDVLDLRVNNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANIRNPRNGQGNATSGGFPIARPGTGGMMPGMPGTRKVPGMPGIDNDNWEIPRNRSMPRGEMSAGQPTAHGQSLIYKTAAVSSKLLPQGTGGFISGSSSALIHGGGGGGGGAPPTIPSNFGSDAEAPPVKVAPAISSEKPLSPAPKMSTDDLQRKTRSLLEEYFSVRLLDEALQCVEELKSPAYHPEVVKEAISLALDKSPPCVEPVGNLLEYLLDKRILTARDIGTGSLLFAFMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVAHEILKKVEDDLFQKAIFDAVIQVIASSSGQVLESQASDVEACRSLLK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1034 780 MobiDBLite consensus disorder prediction 145 159 - -
Lele23g1034 780 Pfam MIF4G domain 208 434 IPR003890 GO:0003723|GO:0005515
Lele23g1034 780 FunFam Eukaryotic translation initiation factor isoform 4G-2 199 435 - -
Lele23g1034 780 SMART if4_15 208 434 IPR003890 GO:0003723|GO:0005515
Lele23g1034 780 MobiDBLite consensus disorder prediction 160 174 - -
Lele23g1034 780 SUPERFAMILY ARM repeat 202 437 IPR016024 -
Lele23g1034 780 SUPERFAMILY ARM repeat 610 759 IPR016024 -
Lele23g1034 780 Pfam MA3 domain 617 729 IPR003891 -
Lele23g1034 780 ProSiteProfiles MI domain profile. 616 738 IPR003891 -
Lele23g1034 780 MobiDBLite consensus disorder prediction 1 39 - -
Lele23g1034 780 MobiDBLite consensus disorder prediction 461 482 - -
Lele23g1034 780 Gene3D - 199 435 - -
Lele23g1034 780 Gene3D - 609 775 - -
Lele23g1034 780 MobiDBLite consensus disorder prediction 118 174 - -
Lele23g1034 780 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 69 765 IPR045208 GO:0003743
Lele23g1034 780 SMART ma3_7 617 729 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1034 Lele-ChrLele23 15952281 15958132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1034 1 778 Eukaryotic Initiation Factors Gene Family AT5G57870 61.893 0.0 918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1034 23 15952281 15958132 Lele23g1034 23 15952281 15958132 ECH
Lele21g1017 21 7238677 7244065 Lele23g1034 23 15952281 15958132 hybridization
Lele22g1035 22 7365990 7371345 Lele23g1034 23 15952281 15958132 hybridization