Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1025 ATGGCATTGAAAGCCCAAGTTCTGCATCTCTTCTTGTTGTTGCTGGGCCTGTACGCGGTTTCGGCGTCGTCGTCCGGCGGTGTTCCGAAAGAGCAAGAGGACGATCGAATCTCGGCCCTCCCCGGACAGCCGGCGGTGCCATTTTCTCAGTTCTCCGGTTACGTCACGGTGAACGAGAAGCATGGGCGAGCACTGTTTTACTGGTTGACGGAGGCTTACACTTCCCCTCACACCAAGCCTCTCGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCAGTGGCATATGGGGCATCGGAGGAAATTGGACCATTCCGGATAAATAAAACTGGTTCTTCGTTGTATCTTGACAAGTATTCATGGAACAGAGAAGCAAATATTCTCTTTCTTGAATCTCCTGCTGGTGTAGGTTTCTCCTACACAAATAGAAGCTCTGACCTCAAAACTTCTGGTGACGAAAGGACAGCTCAGGATGCTCTAATTTTTCTAATCAGATGGATGTCAAGATTTCCACAATATAAGTACAGAGACTTCTACATTTCTGGAGAGAGTTATGCAGGACACTATGTTCCCCAGTTGGCTCAAAAAATTTACCATTATAATAAAGCCAATCCCCATATCATTAATCTCAAAGGTTTCATTGTGGGAAATGCTGTGACAGATAACTACTATGATGGGATTGGAACTGTGACATATTGGTGGAGCCATTGTATGATATCTGATAAATCATACAAAACTATCCTCAAACACTGCAATTTCACGGCGGAGAAAACATCTAAAATATGTGATGATGCTGTGCGTTATGCAATTAACCATGAATTTGGACACATTGATCAGTACAGTATTTATACCCCTACATGCGGAACCAACAGTACTGCACAGTACTTAAGGCTCAAGAGTACAATATTACATAGGATTTCAGGGTATGATCCATGCACTGAAAATTATGCAGAGAAATACTATAATCTCCCTGAAGTGCAAAAAGCAATGCATGCAAATGTTACAGGCATTCCTTACAAATGGACTGCATGCAGTGATGTGCTCTTAAAATACTGGAACGACTCTGCAGTTTCTGTATTGCCTATTTACAAAGAGTTAATTGCAGCTGGTTTGAGAATCTGGGTTTTCAGTGGGGATACAGATTCAGTGGTTCCAGTGACTGCCACTAGATTTTCCCTCAACAGTCTCAAACTCAAGATTAATACTCGTTGGTACCCATGGTACATTGGTGGACAGGTGGGTGGATGGACAGAGGTGTATGATGGACTAACTTTTGCTGCAGTACGAGGAGCAGGGCATGAGGTGCCATTGTTTCAGCCAAGAAGAGCTTTCACTCTGTTCAAGTCATTTTTGGAAGGAAAGAAGCTTCCAACATCTTGA 1380 0.4377 MALKAQVLHLFLLLLGLYAVSASSSGGVPKEQEDDRISALPGQPAVPFSQFSGYVTVNEKHGRALFYWLTEAYTSPHTKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLDKYSWNREANILFLESPAGVGFSYTNRSSDLKTSGDERTAQDALIFLIRWMSRFPQYKYRDFYISGESYAGHYVPQLAQKIYHYNKANPHIINLKGFIVGNAVTDNYYDGIGTVTYWWSHCMISDKSYKTILKHCNFTAEKTSKICDDAVRYAINHEFGHIDQYSIYTPTCGTNSTAQYLRLKSTILHRISGYDPCTENYAEKYYNLPEVQKAMHANVTGIPYKWTACSDVLLKYWNDSAVSVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNSLKLKINTRWYPWYIGGQVGGWTEVYDGLTFAAVRGAGHEVPLFQPRRAFTLFKSFLEGKKLPTS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1025 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Lele23g1025 459 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Lele23g1025 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 440 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 Gene3D - 359 453 - -
Lele23g1025 459 Pfam Serine carboxypeptidase 42 453 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 SUPERFAMILY alpha/beta-Hydrolases 31 457 IPR029058 -
Lele23g1025 459 FunFam Carboxypeptidase 308 456 - -
Lele23g1025 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Lele23g1025 459 Gene3D - 312 349 - -
Lele23g1025 459 FunFam Carboxypeptidase 31 289 - -
Lele23g1025 459 FunFam Carboxypeptidase 359 453 - -
Lele23g1025 459 Gene3D alpha/beta hydrolase 31 289 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1025 Lele-ChrLele23 15890120 15896918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1025 317 456 Calmodulin-binding Proteins AT2G22960 29.787 2.87e-15 72.4