Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele23g1017 | ATGGCTGACCGTGAGAGCTCCGGAACTCTCATAGACGGTAATTCTGAACTGCGAGAACACAACGAATCAGCAGAAGAAGAAGAAGGAAAAGAAGCAAAGGGAGAGGAACTAAATCGAGTCTCTGAAGCATTGCCTAGCGAGTCGCAGCGAGGCGACTTGCAGAATTCTGAACCTTCCCGGGAAGCAGAGCCACCGGAGCGTAATTCAGAAACCCTGGCTGTGCCCACTTCGCTTGAACCCCAAGAGAAAGATCAGAGTGCCGAATTGCAGGCGAGCTCTACTACGCAGGCGGTTGTTAAAGGCGAAAATAAGGAGCCGGTTGGACCTTCTGACAAGGAACTTACTGAAAGAGAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACTTCAGTTGTCGGTGTGTTCAAGTGTATTGTCAGAACTGTCACCAACATCTGTAACGCAATCTTTATCATCTGCTCCTAGTTCAGCTGTACCAGAACAAAGGCAGTCTTCTCCAAAGGTTAATAATGCAATTGTGCTGCAGGAAGTAGACAAGGAAAAGCCTTCTCGCCGTAATACCTTATCTCCTGTTTCTGTTGTGAGGGCATCCACATCTGATGGATACAATTGGCGGAAGTATGGCCAGAAGCAAGTGAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAATGCTGTGACCATTCAGGCCATGTAGTAGAGGTTGTATATAAAAGTCAACACAGCCACGATCCACCACGGAAGACTAACTTCGGTAGAGAAAGTAAGTTTGCACCATCCAAACAGCCTAATGTGGAGAACCTTGTTCTAGAGAAGCCCATCAGAGTGCTCAATGATTCAAATCCTTGCCCTTCTTCAAAGGAACCTCCACAAGGTGCACCATGCAGTGCTGATAGGAAAAGAGAAAACTCATCTGATCAAAGGGATAACGGTAAAGTTGACTCGAAGGATGATCATGTTATCGAGACAGAGCCAAAAAAAAGAGTGAAGAAAGATGACTATACATCCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGAGATGTCGGGATATCAGGTGATGGATATAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAACCCTCATCCTAGAAACTACTACAGATGCACTTCAGCTGGATGTCCTGTCCGTAAGCACATCGAGACTGCGGTAGATAACTCTAATGCAGTAATCATCACATACAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGCCCACCAAGTGCCCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACAGGAGTTCAAGAAAACAGACAAACTGCAGAAGCAAAAATCCTCTACGCAGTGGTCGGTGGACACAGAAGGCGAATTAACTGGGGAAGCCTTGGAACTCGGGGGTGAGAAAGCAATGGAATCAGCTCGAACACTCTTGAGCATTGGTTTCGAAATAAAGCCTTGCTGA | 1542 | 0.4598 | MADRESSGTLIDGNSELREHNESAEEEEGKEAKGEELNRVSEALPSESQRGDLQNSEPSREAEPPERNSETLAVPTSLEPQEKDQSAELQASSTTQAVVKGENKEPVGPSDKELTERESVQTTQTQIENQLQLSVCSSVLSELSPTSVTQSLSSAPSSAVPEQRQSSPKVNNAIVLQEVDKEKPSRRNTLSPVSVVRASTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVVEVVYKSQHSHDPPRKTNFGRESKFAPSKQPNVENLVLEKPIRVLNDSNPCPSSKEPPQGAPCSADRKRENSSDQRDNGKVDSKDDHVIETEPKKRVKKDDYTSLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPVSMNNSQEFKKTDKLQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC | 513 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 312 | 352 | - | - | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 459 | 478 | - | - | |
Lele23g1017 | 513 | Gene3D | WRKY domain | 358 | 434 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | Gene3D | WRKY domain | 191 | 260 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 70 | 100 | - | - | |
Lele23g1017 | 513 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 124 | 464 | IPR044810 | GO:0003700 | |
Lele23g1017 | 513 | ProSiteProfiles | WRKY domain profile. | 368 | 433 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | SUPERFAMILY | WRKY DNA-binding domain | 369 | 433 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 145 | 194 | - | - | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 1 | 128 | - | - | |
Lele23g1017 | 513 | FunFam | WRKY transcription factor | 358 | 434 | - | - | |
Lele23g1017 | 513 | SMART | WRKY_cls | 200 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | SMART | WRKY_cls | 373 | 432 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 15 | 40 | - | - | |
Lele23g1017 | 513 | ProSiteProfiles | WRKY domain profile. | 201 | 259 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | SUPERFAMILY | WRKY DNA-binding domain | 199 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 290 | 354 | - | - | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 251 | 278 | - | - | |
Lele23g1017 | 513 | MobiDBLite | consensus disorder prediction | 145 | 173 | - | - | |
Lele23g1017 | 513 | Pfam | WRKY DNA -binding domain | 375 | 430 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele23g1017 | 513 | Pfam | WRKY DNA -binding domain | 202 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele23g1017 | Lele-ChrLele23 | 15806103 | 15813398 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele23g1017 | 76 | 513 | WRKY Transcription Factor Family | AT4G30935 | 52.252 | 2.22e-133 | 393 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lele23g1017 | WRKY | 1.7e-23 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele23g1017 | 23 | 15806103 | 15813398 | Lele23g1017 | 23 | 15806103 | 15813398 | ECH | |
Lele21g1030 | 21 | 7379277 | 7386937 | Lele23g1017 | 23 | 15806103 | 15813398 | hybridization | |
Lele22g1048 | 22 | 7468373 | 7474298 | Lele23g1017 | 23 | 15806103 | 15813398 | hybridization |