Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1017 ATGGCTGACCGTGAGAGCTCCGGAACTCTCATAGACGGTAATTCTGAACTGCGAGAACACAACGAATCAGCAGAAGAAGAAGAAGGAAAAGAAGCAAAGGGAGAGGAACTAAATCGAGTCTCTGAAGCATTGCCTAGCGAGTCGCAGCGAGGCGACTTGCAGAATTCTGAACCTTCCCGGGAAGCAGAGCCACCGGAGCGTAATTCAGAAACCCTGGCTGTGCCCACTTCGCTTGAACCCCAAGAGAAAGATCAGAGTGCCGAATTGCAGGCGAGCTCTACTACGCAGGCGGTTGTTAAAGGCGAAAATAAGGAGCCGGTTGGACCTTCTGACAAGGAACTTACTGAAAGAGAATCAGTCCAGACAACTCAAACACAGATAGAAAATCAACTTCAGTTGTCGGTGTGTTCAAGTGTATTGTCAGAACTGTCACCAACATCTGTAACGCAATCTTTATCATCTGCTCCTAGTTCAGCTGTACCAGAACAAAGGCAGTCTTCTCCAAAGGTTAATAATGCAATTGTGCTGCAGGAAGTAGACAAGGAAAAGCCTTCTCGCCGTAATACCTTATCTCCTGTTTCTGTTGTGAGGGCATCCACATCTGATGGATACAATTGGCGGAAGTATGGCCAGAAGCAAGTGAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTTGTGCTAAGAAGATTGAATGCTGTGACCATTCAGGCCATGTAGTAGAGGTTGTATATAAAAGTCAACACAGCCACGATCCACCACGGAAGACTAACTTCGGTAGAGAAAGTAAGTTTGCACCATCCAAACAGCCTAATGTGGAGAACCTTGTTCTAGAGAAGCCCATCAGAGTGCTCAATGATTCAAATCCTTGCCCTTCTTCAAAGGAACCTCCACAAGGTGCACCATGCAGTGCTGATAGGAAAAGAGAAAACTCATCTGATCAAAGGGATAACGGTAAAGTTGACTCGAAGGATGATCATGTTATCGAGACAGAGCCAAAAAAAAGAGTGAAGAAAGATGACTATACATCCCTGGATTCTCCAGTAAAACCTGGAAAGAAACAGAAGTTTGTTGTACATGCAGCAGGAGATGTCGGGATATCAGGTGATGGATATAGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAACCCTCATCCTAGAAACTACTACAGATGCACTTCAGCTGGATGTCCTGTCCGTAAGCACATCGAGACTGCGGTAGATAACTCTAATGCAGTAATCATCACATACAAGGGAGTTCATGACCATGACATGCCTGTGCCTAAGAAACGGCATGGCCCACCAAGTGCCCCTCTTGTGGCTGCAGCAGCACCTGTTTCAATGAACAATTCACAGGAGTTCAAGAAAACAGACAAACTGCAGAAGCAAAAATCCTCTACGCAGTGGTCGGTGGACACAGAAGGCGAATTAACTGGGGAAGCCTTGGAACTCGGGGGTGAGAAAGCAATGGAATCAGCTCGAACACTCTTGAGCATTGGTTTCGAAATAAAGCCTTGCTGA 1542 0.4598 MADRESSGTLIDGNSELREHNESAEEEEGKEAKGEELNRVSEALPSESQRGDLQNSEPSREAEPPERNSETLAVPTSLEPQEKDQSAELQASSTTQAVVKGENKEPVGPSDKELTERESVQTTQTQIENQLQLSVCSSVLSELSPTSVTQSLSSAPSSAVPEQRQSSPKVNNAIVLQEVDKEKPSRRNTLSPVSVVRASTSDGYNWRKYGQKQVKSPTGSRSYYRCTHSECCAKKIECCDHSGHVVEVVYKSQHSHDPPRKTNFGRESKFAPSKQPNVENLVLEKPIRVLNDSNPCPSSKEPPQGAPCSADRKRENSSDQRDNGKVDSKDDHVIETEPKKRVKKDDYTSLDSPVKPGKKQKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPVSMNNSQEFKKTDKLQKQKSSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1017 513 MobiDBLite consensus disorder prediction 312 352 - -
Lele23g1017 513 MobiDBLite consensus disorder prediction 459 478 - -
Lele23g1017 513 Gene3D WRKY domain 358 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 Gene3D WRKY domain 191 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 MobiDBLite consensus disorder prediction 70 100 - -
Lele23g1017 513 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 124 464 IPR044810 GO:0003700
Lele23g1017 513 ProSiteProfiles WRKY domain profile. 368 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 SUPERFAMILY WRKY DNA-binding domain 369 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 MobiDBLite consensus disorder prediction 145 194 - -
Lele23g1017 513 MobiDBLite consensus disorder prediction 1 128 - -
Lele23g1017 513 FunFam WRKY transcription factor 358 434 - -
Lele23g1017 513 SMART WRKY_cls 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 SMART WRKY_cls 373 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 MobiDBLite consensus disorder prediction 15 40 - -
Lele23g1017 513 ProSiteProfiles WRKY domain profile. 201 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 SUPERFAMILY WRKY DNA-binding domain 199 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 MobiDBLite consensus disorder prediction 290 354 - -
Lele23g1017 513 MobiDBLite consensus disorder prediction 251 278 - -
Lele23g1017 513 MobiDBLite consensus disorder prediction 145 173 - -
Lele23g1017 513 Pfam WRKY DNA -binding domain 375 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele23g1017 513 Pfam WRKY DNA -binding domain 202 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1017 Lele-ChrLele23 15806103 15813398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1017 76 513 WRKY Transcription Factor Family AT4G30935 52.252 2.22e-133 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele23g1017 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g1017 23 15806103 15813398 Lele23g1017 23 15806103 15813398 ECH
Lele21g1030 21 7379277 7386937 Lele23g1017 23 15806103 15813398 hybridization
Lele22g1048 22 7468373 7474298 Lele23g1017 23 15806103 15813398 hybridization