Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1016 ATGTCTGGAAATTTGTTTCAGGGTTCAGTAATGGGTGCATTTCAGGGAAGCTTGGAGGTTATTGATCTTAGCAAGAACCAATTTCAGGGTCATGTTTCTCAAGTACAATTCAATTCTAACTTCAACTGGTCTCGTTTAGTTTATCTGGATTTGTCTGAGAATCAGTTTAGTGGTGAAATTTTCCATAACTTGAATGAAGCCAAGAATCTGAAACACCTAAATTTTGCACACAATAGATTTAGCAGACAGAAACTCCCTCAGATTGAGATGCTTTCTGTGTTGGAATACTTGAACTTGTCTAGAACTAGTCTTGTTGGTCATATTCCTTATGAAATCTCACAACTGAAACATTTGAATGTTCTGGATATATCTATGAATCATCTCGTTGGGAAAATCCCATTACTGAGAAACAAAAATCTCCAAATTCTTGACCTTTCTATGAACAATTTGAGTGGTGAAATACCCCAATCTGTCTTAGACAAGCTCCCTGGAATGACCAAGTATAACTTCTCATATAACAACTTCACCTTCTGTGATTCAACATTTACCTCTGAAATCATCAAGAAGGCATTCTATGGATCAGTTAACAGTTGCCCAATTGCTGTAAACCCCACAATTGTAAGAAAAAGAGGCACTGATAGAAACGGAATGAAGTTGGCTCTTGGATTGACTCTAGCAATGATCTGCCTTCTTGCTGGGCTTTTATTTCTAGCATTTGGCCGTAGAAGGAGGACAAAAATGTGGGCAGTGAAGCAAGCTTCGTACAAAGAAGAACAGAACATCTCAGGACACTTTGTAGGTACCCTTTTGGCTGAAGGGAAGTTTGGGCCTGTTTATAGAGGCTTTCTACCTGGTGGGATTCATGTAGCAGTTAAGGTTCTGGTTGTTGGCTCTACATTGATAGATCAAGAGGCTGCGAGGGAGCTCGAGTATCTTGGTCGGATCAAGCATCCCAATCTTGTTCCTTTAACCGGTTATTGTCTAGCTGGAGATCAGAGGATTGCTATATATGAATACATGGAGAATGGGAACCTGCAAAACTTGCTCCATGACCTGCCACTTGGAGTGCATAGTCCAGAAGATTGGAGCAGAGACACATGGGAGGAAGATGACAATGTTGGCGGGATTCAAAACGCCGGCTCTGAGGGATTACTCACATCTTGGAGATTTCGTCACAAGATCGCCCTAGGCACTGCCCGAGCACTGGCCTTTCTTCACCATGGCTGCTCGCCTCCAATCATTCACAGAGATGTCAAGGCCAATAGTGTTTATCTGGACTACAACCTTGAACCAAGGTTGTCTGATTTTGGTCTAGCTAAGGTCTTTGGTGATGGCTTGAATGAGGAAATTGCACATGGCTTGCCCGGTTATGTTCCACTTGAGTTTTCCCAACCTGAACAAAACTCCCCAACCCAAAAATCTGATGTGTACTGTTTTGGAGTTGTACTGACTGAGCTGATGACAGGTAAGAAACCTGTCGTGGATGATTATCATGATGAAAATGATGGAACTTTGGTTAGTTGGGTTAGAGGACTGGTGAGAAAGAATGAAGCTTCAAGAGCGATCAATCAGAAAATTCGCGACACGGGTTCAGAAGAACAAATGGAGGAGGCAATGAAGATCGGTTATTTTTGA 1635 0.4202 MSGNLFQGSVMGAFQGSLEVIDLSKNQFQGHVSQVQFNSNFNWSRLVYLDLSENQFSGEIFHNLNEAKNLKHLNFAHNRFSRQKLPQIEMLSVLEYLNLSRTSLVGHIPYEISQLKHLNVLDISMNHLVGKIPLLRNKNLQILDLSMNNLSGEIPQSVLDKLPGMTKYNFSYNNFTFCDSTFTSEIIKKAFYGSVNSCPIAVNPTIVRKRGTDRNGMKLALGLTLAMICLLAGLLFLAFGRRRRTKMWAVKQASYKEEQNISGHFVGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLIDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYEYMENGNLQNLLHDLPLGVHSPEDWSRDTWEEDDNVGGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKANSVYLDYNLEPRLSDFGLAKVFGDGLNEEIAHGLPGYVPLEFSQPEQNSPTQKSDVYCFGVVLTELMTGKKPVVDDYHDENDGTLVSWVRGLVRKNEASRAINQKIRDTGSEEQMEEAMKIGYF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1016 544 Gene3D Phosphorylase Kinase; domain 1 270 340 - -
Lele23g1016 544 Pfam Protein tyrosine and serine/threonine kinase 268 495 IPR001245 GO:0004672|GO:0006468
Lele23g1016 544 SUPERFAMILY Protein kinase-like (PK-like) 259 518 IPR011009 -
Lele23g1016 544 Pfam Leucine Rich repeat 137 153 IPR001611 GO:0005515
Lele23g1016 544 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 179 - -
Lele23g1016 544 Gene3D Transferase(Phosphotransferase) domain 1 341 543 - -
Lele23g1016 544 FunFam Calmodulin-binding receptor kinase CaMRLK 16 134 - -
Lele23g1016 544 FunFam Putative LRR receptor-like serine/threonine-protein kinase 249 339 - -
Lele23g1016 544 SUPERFAMILY L domain-like 2 177 - -
Lele23g1016 544 ProSiteProfiles Protein kinase domain profile. 264 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1016 544 Gene3D Ribonuclease Inhibitor 1 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1016 Lele-ChrLele23 15792392 15802091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1016 10 519 Receptor kinase-like Gene Family AT5G65700 31.903 4.29e-64 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele23g1016 PK_Tyr_Ser-Thr 1.1e-30 CL0016