Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1011 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCAGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGCTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGATGGGATTATTTCTCAACTTCGAGAGCACTTCTCTGACGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCTAACATATTGTCCCAGTATGACATTACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAATGAAAGTTGGCTCTCACTTGGGCGGCATAATATTCTGTTGATGCACTGTGAACGTGGTGGTTGGCCCGTTTTGGCTTTCATGCTGTCTGCCCTTTTGATTTTTCGAAAGCAATATAGTGGAGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATCTTTTGAGGAATGTGGCCATAGAATGGCCTCCATTGGACAGGGCGCTCACGTTGGATTGCGTCATTCTCAGATGTTTCCCGGACTTTGATGGTGAAGGTGGATGTTGTCCAGTATTTCGAGTTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCCAAAGTCCTGTACTCAACAAAGAAGAACGCAAAATCGTCCGATTTTACAAGCAGATATTGTCAAATTCCACCATGGCTTCTTGGCCTTGCAACAGTTTGGATGAGTTCAGAAGGGCCCCATTCTTTTGAAGCCTATTTTCCTGGAATGCTAATTGGAGAGTGTGAATTAATTAAAATTGACATCAACTGCCATATCCAAGGTGATGTTGTAATTGAAAGCATTAACTTGACCAGTGACATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACGGCTTTTATTAGGTCTAATATATTGATGCTTAACCTGGACGAAGTTGACATTTTCTGGGATTCTAAAGATCAATTCCCCAAGGGTTTCAGAGCGGAGATCCTTTTCTCAGAGATTGATGCTGCTGCTGCTATTATTGCGGATGGTACCTCATGGCTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAGGGCTGATGCTGCACTAAATGTACTCCAACAACTTAGTGCTTCAGTGCATGACAAGTTGGATATAATTTCTGCTCAGCAGCATGATACAGGATCTTTGTTGCATGAAAAAGATCCTAAAAGTTCTGCAAAGCTTGAGGTCAAAGCACAGGTGGATGATCTTGCCTTGTCTAGTTCTCTCGATACTTCTAGTGAACCATTTTCACCAAAAACACCTCCACAGAATCTTTCCTTGACTAGTAATTCTGAAAACGTTGGTGATACTCCACCCAACGCACAATTACCTTCTCATCTTTCCCCTCTAGGACCAGGTTATCCTCTTACTGGAGAAATTAAAGCCCAATCACAAGACAGAAGTGAGTCATCCAACTTTAGTTCAACATCTGGAACTTCATTATCAGGTACCTTTTCAAATAAGCTGCCTCTTGATTCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTCTGAAGGAGATGCTACCTGTTAGAACTAGACCTGCTTCATCCATTTCACAAGCTCCAACACCACCCACACCCCCAACTCCTCCTCAAAAGGAACATAAACTGGTTAGAGCCGTACCTCCGCCACCGCCACCACTTCCACAGAAAGAACAATCACTAGTTAGAGTCATGCCTCCTCCACCCCCACCAAAGGAGGAATTACATTGTCAACTTGGAGCCCCTCCTTCCCAACCACCTCCTCTAAAGGAGGAGCCTAAAGTTAAAACTGGACCACCACCACCTCCACCACCTCCTCTAAAGGTGGAGCCACCTGTTAGAGCTCAACCTCTGCCTCCTCCACGTCTTCCTGGGAAAGCTGATTCTACCACAGTATCACCGCCACCTCCTCCTCCTCTCCCTGTTGCAGCACTCTCCAAACACCCTAATCCTTCGTCGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCATCACCTCCGGTTCCCTTTGGTAAAGGAGATGGAAATAGTGCGTTTAGTACTACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATAAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTCGAGAGTCTCTTCTCAGCAGCAGCCCCAAGTTCAGGCGCCACCAAGAATGTCGGTGTGAAAAGTTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCATGATTTGATGAGCTCAGTGCTAGCACTAGAGGAGCCGACACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGGTGGAATTACTCAAGGGCTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGGATTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTGCTGTAGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATTCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGCTCTGCTATTGGATTCAAATTGGATAGCCTTCTTAAACTCACTGAGACGAGAGCACGAAACAATAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGTCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCAGCAAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAATCTCTGAAAATGACGGACCTATAACTGAGACATTTCGCAAGACTTTGAAAGATTTCCTCCGTTCTGCTGAAGTTGAAGTCCGATCACTGGCTTCATTACATTCTGGCGTGGGTAGGAAAGTGGATTCGTTGATTGTTTATTTTGGGGAAGATCCTGCTCGCTGCCCTTTTGAGCAAGGTGTCTTTCTTTCTTAG 3237 0.4436 MTLLRKLFFRKPPDGLLEICERVYAFDCCFMTDAWNEENYKVYMDGIISQLREHFSDASILVFNFRQEETKSQMANILSQYDITIMDYPRQYEGCPVLKMEVIHHFLRSNESWLSLGRHNILLMHCERGGWPVLAFMLSALLIFRKQYSGEQRTLDMVYRQAPRELLHLLRNVAIEWPPLDRALTLDCVILRCFPDFDGEGGCCPVFRVYGQDPFLADKTPKVLYSTKKNAKSSDFTSRYCQIPPWLLGLATVWMSSEGPHSFEAYFPGMLIGECELIKIDINCHIQGDVVIESINLTSDMDHERMMFRVMFNTAFIRSNILMLNLDEVDIFWDSKDQFPKGFRAEILFSEIDAAAAIIADGTSWLEEKEGLPVEAFAKVQEIFNHVDWLNPRADAALNVLQQLSASVHDKLDIISAQQHDTGSLLHEKDPKSSAKLEVKAQVDDLALSSSLDTSSEPFSPKTPPQNLSLTSNSENVGDTPPNAQLPSHLSPLGPGYPLTGEIKAQSQDRSESSNFSSTSGTSLSGTFSNKLPLDSASHFSASSMTSTQPSPSPTTPLKEMLPVRTRPASSISQAPTPPTPPTPPQKEHKLVRAVPPPPPPLPQKEQSLVRVMPPPPPPKEELHCQLGAPPSQPPPLKEEPKVKTGPPPPPPPPLKVEPPVRAQPLPPPRLPGKADSTTVSPPPPPPLPVAALSKHPNPSSQNSTSVPAAPNAPSPPVPFGKGDGNSAFSTTGPRGRILSRTISSTKNKNKKLKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDMSELESLFSAAAPSSGATKNVGVKSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEEPTLDIDQVENLIKFCPTKEEVELLKGYTGEKEKLGRCEQDSDLRKSLNIVDAAVEEIRNSVKLKRIIQTILSLGNALNQGTARGSAIGFKLDSLLKLTETRARNNKMTLMHYLCKVLSDKLPEVLDFSKDLANLEPAAKFLAEEMQAISKGLEKVIQELSISENDGPITETFRKTLKDFLRSAEVEVRSLASLHSGVGRKVDSLIVYFGEDPARCPFEQGVFLS 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1011 1078 MobiDBLite consensus disorder prediction 574 693 - -
Lele23g1011 1078 Gene3D - 181 354 - -
Lele23g1011 1078 SMART PTEN_C2_2 179 351 IPR014020 -
Lele23g1011 1078 Gene3D Formin, FH2 domain 895 1077 IPR042201 -
Lele23g1011 1078 ProSiteProfiles C2 tensin-type domain profile. 181 352 IPR014020 -
Lele23g1011 1078 Pfam Formin Homology 2 Domain 896 1073 IPR015425 -
Lele23g1011 1078 Pfam Formin Homology 2 Domain 745 893 IPR015425 -
Lele23g1011 1078 SUPERFAMILY Formin homology 2 domain (FH2 domain) 818 1073 - -
Lele23g1011 1078 MobiDBLite consensus disorder prediction 450 487 - -
Lele23g1011 1078 Pfam C2 domain of PTEN tumour-suppressor protein 182 351 IPR014020 -
Lele23g1011 1078 MobiDBLite consensus disorder prediction 450 736 - -
Lele23g1011 1078 MobiDBLite consensus disorder prediction 695 709 - -
Lele23g1011 1078 ProSiteProfiles Formin homology-2 (FH2) domain profile. 730 1078 IPR015425 -
Lele23g1011 1078 Gene3D Formin, FH2 domain 740 894 IPR042201 -
Lele23g1011 1078 MobiDBLite consensus disorder prediction 504 555 - -
Lele23g1011 1078 SMART it6_source 743 1078 IPR015425 -
Lele23g1011 1078 PANTHER FORMIN-J 1 1073 - -
Lele23g1011 1078 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 184 352 IPR035892 -
Lele23g1011 1078 Gene3D Protein tyrosine phosphatase superfamily 15 174 IPR029021 -
Lele23g1011 1078 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 161 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1011 Lele-ChrLele23 15737088 15746533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1011 1 413 Protein tyrosine phosphatase (PTP) family AT5G58160 57.834 6.04e-168 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1037 21 7436176 7443936 Lele23g1011 23 15737088 15746533 hybridization
Lele22g1054 22 7538641 7547780 Lele23g1011 23 15737088 15746533 hybridization