Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g1006 ATGGAAGAGAAAGCCAAAGCTTCTTGCCATTCCGCGTTGCTTCACGGCAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTCGCCAAGGTCTACCATGCCAAGAACTTGCGGACCGGGAAAAGCGTGGCTCTGAAGGTGGTCGGCAAAGAGAAAGTGATTAAAGTGGGCATGATGGAGCAAATCAAGAGGGAGATTTCTGTGATGAAGATGGTGGAGCATCCCAACATCGTTGAGCTTTATGAGGTTATGGCGAGCAAATCCAAGATCTATATCGCTATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGCCTGAGGGAAGACGTCGCACGAGTCTATTTCCAGCAGTTGATCTCAGCCATCGATTTCTGCCACAGTCGCGGCGTTTACCACCGCGATCTCAAGCCGGAGAATCTGCTTCTCGACGAGGATGGGAATTTGAAGGTAACTGATTTTGGCCTGAGCACGTTTGCTGAGCACTTGCGGCAAGATGGGTTGCTTCACACCACTTGCGGTACTCCGGCGTACGTGGCGCCGGAGGTAATCAGTAGGAAAGGCTACGACGGTGCTAAGACCGATATCTGGTCTTGTGGGGTCATCCTGTATGTGCTTCTCGCCGGATTCTTGCCCTTCCAGGATGACAACTTGATGGCTATGTACCGGAAAATTTACAGGGGTGACTTCAAATGCCCGCCGTGGTTCTCCTCCGACGCTCGCCGGCTGATAACAAATCTCCTCGACCCAAACCCGAATACCCGAATCACCATATCCGAAATCATGGACTCGCCCTGGTTCAAAAAATCCATCCCCAAGAGGATGGTGACAAAGGAGGAACAGGAATTCGATTGTGATAGCGACAAATCAAAGCAGCAGCAAGAATCTCCGGCGACAATGAACGCGTTTCACATAATATCATTATCGGAAGGGTTCGATTTGTCTCCATTGTTCGAAGAGAAAAAGAGGGAGGAGAAGGAAGAGCTGAGATTCGGGACAACGAGGCCGGCGAGCAGCGTGATATCGAAGCTAGAAGAGGTGGCGAAGGCAGAGAGGTTCAACGTGAAGAAGAGCGACACAAGAGTGAGGCTGCAGAGACAAGAATGCGGAAGAAAAGGGAAGCTGGCGATAGCGGCGGACATATACGCCGTGACGCAGTCATTTCTGGTGGTGGAGGTGAAGAAGGACAACGGTGATACGTTAGAGTACAACCAATTCTGCAGCAAAGAGCTCCGCCCTGCGCTAAAAGATATCGTGTGGACTTCGCCGCCGGAAAGCTCCACGCCTGCTTGA 1308 0.5214 MEEKAKASCHSALLHGKYELGRLLGHGTFAKVYHAKNLRTGKSVALKVVGKEKVIKVGMMEQIKREISVMKMVEHPNIVELYEVMASKSKIYIAMELVRGGELFNKIARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFAEHLRQDGLLHTTCGTPAYVAPEVISRKGYDGAKTDIWSCGVILYVLLAGFLPFQDDNLMAMYRKIYRGDFKCPPWFSSDARRLITNLLDPNPNTRITISEIMDSPWFKKSIPKRMVTKEEQEFDCDSDKSKQQQESPATMNAFHIISLSEGFDLSPLFEEKKREEKEELRFGTTRPASSVISKLEEVAKAERFNVKKSDTRVRLQRQECGRKGKLAIAADIYAVTQSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWTSPPESSTPA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g1006 435 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Lele23g1006 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 422 - -
Lele23g1006 435 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1006 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Lele23g1006 435 Gene3D Transferase(Phosphotransferase) domain 1 100 301 - -
Lele23g1006 435 Gene3D Phosphorylase Kinase; domain 1 15 99 - -
Lele23g1006 435 CDD CIPK_C 306 421 - -
Lele23g1006 435 SUPERFAMILY Protein kinase-like (PK-like) 15 287 IPR011009 -
Lele23g1006 435 Gene3D Kinase associated domain 1, KA1 302 426 - -
Lele23g1006 435 CDD STKc_SnRK3 17 271 - -
Lele23g1006 435 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g1006 435 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lele23g1006 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele23g1006 435 FunFam Non-specific serine/threonine protein kinase 300 425 - -
Lele23g1006 435 FunFam Non-specific serine/threonine protein kinase 8 303 - -
Lele23g1006 435 Pfam NAF domain 302 362 IPR004041 GO:0007165
Lele23g1006 435 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g1006 Lele-ChrLele23 15686987 15688294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g1006 1 429 CBL-interacting serine-threonine protein kinases AT4G30960 74.371 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele23g1006 Pkinase 1.2e-75 CL0016