Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0980 ATGGCTTCCACTCAATCCTTCCTTCTCTTCTCCTTTTTCCTTCATCTTCATTTTCACTCTTCAGCCTCTCAAAGTTGGATCAAAGCTGGTTATTGGTATGTTGGCAGTGAATCCCCCATTCCTGATCTCAACTCTGCTTTGTTCACACACCTTATTTGCTCCTTCGCTAGCGTCAATCCCTCCACTCACGAGATTTCCATACCCAAATCTGATCAACAATATTTCTCTACCTTCACTGACATCGTCAAGCGCAAGAACCCCTCGATCGTCACTCTTTTCTCTGTATGGAACGGACAGCCTGAAACTGCACAGGGTATTCTGGGCAAGAAGGCGAACCATTCGGTCCTTTCTTCGATGCTCAGAATCGCTTCTTCAAGAAAATCTTTCATTCAGTCCTCGATACAAACAGCTAGACGACATGGGTTTCAGGGCATTGACTTGTTCTGGCTTTGGCCTCAAACAGAATCAGATATGGCCAATTTGGGAATTCTGCTTCACGAATTGCGACTTGCTGTGGATTCTGAAAACAGAAGCTCTGGAGAATCGTCGTTGATATTAAGTATGGGTCTTCATTACTTGCCCACTGTTTTTGGGAATTTGAGTTACCCTGTTGATTCTTTGGCGAGGAATTTGAACTGGGGTCATATTCTGGCTTATGATTATCATCTTCCTTCACTGGAAAATTTCACGAATCCTCATGCTGCTCTGTATGATCCTGTGAACCATACGAATACTGATTTTGGTATAAGCAAATGGTTGAGCAGAGGATTTCCTTCTAACAAGCTGCTTCTGGGATTGCCTTACCATGGCTACGCTTGGGCATTGGATAGTCCCAAGGAAACTGAAATTGGTTCTCCATCATCGGGTCTGGCTGTAACACAAGATGGTTCTATGAGCTATAAGTATATCAAGTGGTATGTTCGGAGTTATGGTGCTCCTACGTTGTATAATGCTACCTATGTCGTGAATTATTGCACTATTGGTTCTATTTGGATCAATTTTGATGATGTTGAAGCTATCAGAACTAAGGTTGCTTATGCCAAGGAAAAGAAACTGCTGGGTTACAATGTGTTTCAGGTGATAAATGATGATAATTGGGTGCTTTCTGAGGCAGCTCAAGATGAAGAAACTGATCATGGAAACAGACGGAGGCTATTACTTATTATTTTACTTCCAGTTGCAATCGTCATAACATTGGGAGTCTTTCTTCTGTGCTGCTTAAGAAGCAAGTCATTCAAATCAAAAGTGAAGATGGTGTTTGGCAAAAGTTTCCTGTCTGAGCCAGAAGGTCCCAATGCTGAGAGCCTTGAAACCAGTGCTCCACACCTTGAAGAATTTAGCTTTGCCATCATAAGAGCGGCAACAAAAGACTTTTCTGTAGAAAACAAGCTAGGAGAGGGTGGATTTGGTCCTGTGTACAAGGGAAAACTACCAGGAGGACAAGAAATTGCAGTCAAGAGACTTTCAAAAGCTTCTACTCAAGGACATGAAGAATTTACAAATGAGGTTTCACTTACTGCTAGCCTTCAGCATATCAATCTGGCTAGAGTTTTGGGATTCTGCAATGAGAGAGAAGAAAAAATGCTAATCTATCCGTACATGCCTAACAGAAGCTTGGATTTCTACCTTTACGATCCAAGAAGAAAGAACCTATTGGATTGGGGAAAGCGTGTTCATATTATTGAAGGAATTATCCAAGGACTTCTATATCTCCAAGAATATTCAAATTTCACAATAATTCATCGAGATTTAAAAACTAGCAACATCTTGCTGGATGATAAGATGAATCCAAAAATATCAGATTTTGGAATGGCTAAATTTTTTAGAAAAGATGAAGTTGAAGCAAATACTAAGCGAATTGTTGGCACATATGGTTATGTTCCTCCAGAATATGTTAGAAGAGGCACATACTCAATGAAGTATGATGTTTATAGCTTTGGAGTACTACTTTTACAAATCATTAGTAGCAAGAGGAACACTTGCTATTATGGCATTGATGAGAACTTGAGCATTCTTGAATATGCTTATAATTTGTGGAAAGAGGGTAAAGGTTTGGAATTTGTTGATCCATCCTTAGAAGATTCATCTTCTTCCTGCAAACTTCTGCAATGTTTGCATGTAGCTCTACTGTGTGTGCAGGAAAATCCAGTAGAAAGGCCATCAATGTTGGAGGTTTCTTCCATGCTTAAGAATGAAACTGGGGCAATTCCTTTGCCTAAAAGTCCAGCTTTCTCAACAAAAAGTGATAAAAAAGTAGAAGACAGACCCTCAACATCACAGTCACAGCAAACAAGTTGTTCCATAAATGATGCTTCAATTTCCCAAATAACGCCCAGATAA 2340 0.4017 MASTQSFLLFSFFLHLHFHSSASQSWIKAGYWYVGSESPIPDLNSALFTHLICSFASVNPSTHEISIPKSDQQYFSTFTDIVKRKNPSIVTLFSVWNGQPETAQGILGKKANHSVLSSMLRIASSRKSFIQSSIQTARRHGFQGIDLFWLWPQTESDMANLGILLHELRLAVDSENRSSGESSLILSMGLHYLPTVFGNLSYPVDSLARNLNWGHILAYDYHLPSLENFTNPHAALYDPVNHTNTDFGISKWLSRGFPSNKLLLGLPYHGYAWALDSPKETEIGSPSSGLAVTQDGSMSYKYIKWYVRSYGAPTLYNATYVVNYCTIGSIWINFDDVEAIRTKVAYAKEKKLLGYNVFQVINDDNWVLSEAAQDEETDHGNRRRLLLIILLPVAIVITLGVFLLCCLRSKSFKSKVKMVFGKSFLSEPEGPNAESLETSAPHLEEFSFAIIRAATKDFSVENKLGEGGFGPVYKGKLPGGQEIAVKRLSKASTQGHEEFTNEVSLTASLQHINLARVLGFCNEREEKMLIYPYMPNRSLDFYLYDPRRKNLLDWGKRVHIIEGIIQGLLYLQEYSNFTIIHRDLKTSNILLDDKMNPKISDFGMAKFFRKDEVEANTKRIVGTYGYVPPEYVRRGTYSMKYDVYSFGVLLLQIISSKRNTCYYGIDENLSILEYAYNLWKEGKGLEFVDPSLEDSSSSCKLLQCLHVALLCVQENPVERPSMLEVSSMLKNETGAIPLPKSPAFSTKSDKKVEDRPSTSQSQQTSCSINDASISQITPR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0980 779 Gene3D Glycosidases 42 365 - -
Lele23g0980 779 SUPERFAMILY (Trans)glycosidases 28 375 IPR017853 -
Lele23g0980 779 Gene3D - 268 334 IPR029070 -
Lele23g0980 779 MobiDBLite consensus disorder prediction 734 779 - -
Lele23g0980 779 FunFam Chitotriosidase-1 268 334 - -
Lele23g0980 779 Pfam Glycosyl hydrolases family 18 30 360 IPR001223 GO:0005975
Lele23g0980 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Lele23g0980 779 Gene3D Transferase(Phosphotransferase) domain 1 534 736 - -
Lele23g0980 779 SMART serkin_6 458 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0980 779 SUPERFAMILY Chitinase insertion domain 269 334 IPR029070 -
Lele23g0980 779 CDD GH18_plant_chitinase_class_V 24 369 - -
Lele23g0980 779 SMART 2g34 26 363 IPR011583 GO:0008061
Lele23g0980 779 Pfam Protein kinase domain 459 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0980 779 Gene3D Phosphorylase Kinase; domain 1 433 533 - -
Lele23g0980 779 ProSiteProfiles Protein kinase domain profile. 458 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0980 779 FunFam Uncharacterized protein 433 533 - -
Lele23g0980 779 MobiDBLite consensus disorder prediction 757 779 - -
Lele23g0980 779 FunFam Uncharacterized protein 534 738 - -
Lele23g0980 779 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 379 IPR001223 GO:0005975
Lele23g0980 779 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 363 776 - -
Lele23g0980 779 SUPERFAMILY Protein kinase-like (PK-like) 442 750 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0980 Lele-ChrLele23 15433632 15437203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0980 437 779 Receptor kinase-like Gene Family AT4G11530 51.734 2.55e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele23g0980 Glyco_hydro_18 1e-55 CL0058