Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0966 ATGCCTGACGAGCCTCTCATTGTACCGGCGACTACCATGGGTCGAACGTTAGAATGCTTTCCTCCAACTTCAGCTCGTGAGATCGGTAGCCCAGCGACTATGTCCATTTTTTACCCGGCACAGGTATCTGATGCTGGGCTTGTTGGTGTGGGGTATGGAACTATGTCAACGGGTCCTACTTCCTGGTGCGTTCGTCCAAGTGTGTCAATTGTGCATCCGGCCATGAGTCCTAATGTTGGGTATAACTGTAGTCCTAATTTTGGCAATCGGATTGCTGGTAGCAATGCTGTTGATCTTTCAAGCAGTGTCGTTGCAAATGGACCTGGTTATACCACGATTCTGAGCAACTGGTCTGGGGGCAGTGGCTTGGATAGGGCTGGAAACGATGCAGTTAACGGGTATGGTTGTAGTTCTGGTCAGGGAAATAGAATCATTGGCAGTGCCATTTCTAGTGATCAGGTAGGCAGTACTGCAACAACTGGGTTCGGTAATAGCCCCACTCAGCGGAATGCAGCCGATCTTGCGAGTGATGAGGGTGGGGATGACTCCGTGTCAGGGAGAAAAGTAAAGTTTTTATGCAGTCACGGTGGGAAGATTCTACCTAGACCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACTAGAATAATTAGTGTGAAGAGAGATGTGAGCTTCAACGAACTGATGCAAAAGATTGTTGATACATATGGTCAACCTGTGGTTATCAAGTATCAGCTCCCTGAAGAGGATCTTGATGCGTTGGTTTCAGTTTCTTGCCCAGATGATCTTGAAAATATGATGGATGAGTATGAAAAATTAATAGAAAGATCTTCTGATGGTTCAGCTAAACTAAGGATTTTTCTGTTTTCTGCATCAGAAATTGATGCTCCTGTTGCGGGGCCGTTAGTAGATCTACGTGATAGTGGGCAGAGATATGTTGAGGCTGTGAATGGAATTACAGATGCAGTCAATGGTCGGCTCACGAGGAAAGGGAGTATCACAAGTGCAGCTTCAACCCAAAATTCAGATGTTAGTGGGGCTGAGGCTCTTGATAGTTCTGTTGCTGGTCCAGGGGATGCAAGTGTAACACCATCATCTTGTGTGTTATCACCCAGAGACAATGTGGCAGCTTCTCATGACACTGCTGCAAAGTTGGTGGTGGCAGATCAAAGTCCAAGAGTATACTCAGATGCTTCTGCAGTTCTGGTGGGCACGCAAGTTGCTATGTCTGGTCCAGCCCAGCCTTCAGCTTTCCAGAATGAGGTTGAACTAGAAAAGTCTGTGCCTTTTACTTTACAGCAACAGCAATTTGGAGTGCAGCAATCTGGAATGGACATTTTACCTCCTACACCTTATGTGCATCCTTTTGTTGATTCACGTCAGGAAGTTATGAATCATGCAGATTATGTCCAGCTGCCTCCTCAGGGGGGTTTCCCAAATTCTCAACATTTAGGGAAGCATGGGCCTGCCTTTACTGAACAGCAGTTCCATGATAATATTCAATCTTTTGTTCCACACCAGTTCATCCCTGCAGTGCCAATGACAATGACTCCATCAGCTTCTCATGTTAGTGCAAGACCAAACGTTCCCCAACCATTGATGCAACCCCAGCAAATTCGATTGGACCAATATAATGATGAAAGCACGTCAGGGCCAAAGATCATCCAGCTTCCTGTTGAACAAAACTACAATGCTTACCCAGTTCAAGTTCCTTCTGTTGTGGTTGCTGGTAATTATGGTTGGGTTCAGGTTCCTCCACAAGAGAATGTTATGTTGTCTGACGGTTTGTTACCTCAACAACAAGTAAGAATCCCTGAGAAATTCCAGAAAGAGGAAGATTGTTATATGTGTCAGAAATTATTGCCTCATGCACATTCAGATCCTTTGGTTCCAGATCAGCGGGATGGTGTTGCAAGTTCAATTTCTGATTCAATCCTGAGCTATCATGGTCTCCCTATGGAGGAAAACTTACAAGCTCAAGCCACAAACAGGGTGATGGTGACTTCACCCTTGATGGATGGTGCTATTGAACAAGGGATTGACACCAAATCCAGAGTCGTTAGCAAAGTGGAATCTCCCAGGGGAATACCTTTCGCTAATGCAACAGGCCTTTCTTATAAGCTTGAGTCTGGGGAGAGGAATGTTATACAAAAGCCTGCTGCTTTTGATTATCTGAGGAGTCCCATTATCTCCGATGTGTTTGGAAAGGCAGTAGATAGCCAGTCACCAACTGATGGGTTCATGGGGACGGCACCACTGTCTTGCCTAGATGTTGTTGGCCAACAAACGGTGCCACTTGAAAACTGGGTTAAGCAGGATGTGCTAATGAATAAACCTGTTTATAGTGATACAACTCCTGTTCAAGAGTCCCCTACTGAGCATACAAATGAATTTGTTAACTTGGTCTCCCAGCCGGTGGAATGTAGTCAGATAGCACAAACATCTGTTTGGGACATTCCTGAGTCAAAAAGTGGAAACCTCCTCAAGGATGATAATCTTCCATCTGTCAGGTCTGGAGATGTGCAGAATTCTTCGAACTCACTTTTCAGTAATCAGGATCCCTGGAATGTACACCATAGTACGTACTTTCCTCCTCCAAGACCTAGCAAAGTTCCTTCAAAGAAAGAAATATATTCTTCTAAGGATCACTTTGGTGAGGAATTGACCGGTGACTCTGGGGAACAAAATTTAGAAGCTCAATTGGAGGATAGTCTTTACCAGCCATTCAAACAGAGTTTATATTTAGATCATGGCTATTCAGCCAAGGGCTCAGCTGAAGACCAGATCAAACAAGACCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTGCACCCAAGCACTCCTAGTCCTGATTTACATGGTAGAGATGTGTCCAGTCAGGAAGACGTTGGAGATGTAGATGATCTAAACAGATCTAAAGCTTTGGATGTCAAGAGCAAGCTTCCAGAAAAGCCAAATTTCGGCATTCCTTTATCAGATGGTCTTGAAGGATTGCAGATTATAAAGAATTGTGACCTTGAACAGCTGAGAGAACTAGGTTCAGGTACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCACTGATGTGGCAATCAAGCGTATTAATGATAGGTGCTTTGCTGGAAAGCCTTCTGAGCAAGAGCGCATGAGGACTGACTTCTGGAATGAAGCAATCAAACTTGCTGACTTGCATCATCCAAATGTTGTAGCATTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACAGAGTTTATGGTCAATGGTTCTCTAAGAAATGCCTTGCAGAAAAGTGATAGGAATCTTGACAAGCGCAAGTGCCTTTTGATTGCATTGGATGTGGCATTTGGTATGGAATACCTGCATGGGAAAAATATTGTACACTTCGACTTGAAAAGTGACAACTTGCTAGTGAATCTCAGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCTAAGGTGAAATGTCAGACACTGATCTCCGGTGGTGTGCGAGGAACACTGCCTTGGATGGCTCCGGAACTACTGAATGGAAGCAGTAGCCTTGTTTCTGAGAAGGTTGATGTGTTTTCATTTGGTATTGTGATGTGGGAAATCCTCACGGGAGGGGAGCCATATGCTGATTTGCACTATGGTGCTATTATAGGGGGTATTGTGAGCAACACTTTGCGACCTCCGGTTCCAGATTCCTGTGATCCAGAATGGAAATTGCTGATGGAGCGTTGCTGGTCGTCAGAGCCATCAGAGAGGCCAAGCTTTACTGAGATCGCGAATGAACTACGCTCTATGGCATCCAAGGTTCCTCCCAAAGGACAAGCTCAACAGCAGCAACCCTCTGCATTGCAGGCTCAAGTACTGAAATGA 3900 0.4523 MPDEPLIVPATTMGRTLECFPPTSAREIGSPATMSIFYPAQVSDAGLVGVGYGTMSTGPTSWCVRPSVSIVHPAMSPNVGYNCSPNFGNRIAGSNAVDLSSSVVANGPGYTTILSNWSGGSGLDRAGNDAVNGYGCSSGQGNRIIGSAISSDQVGSTATTGFGNSPTQRNAADLASDEGGDDSVSGRKVKFLCSHGGKILPRPSDGMLRYVGGQTRIISVKRDVSFNELMQKIVDTYGQPVVIKYQLPEEDLDALVSVSCPDDLENMMDEYEKLIERSSDGSAKLRIFLFSASEIDAPVAGPLVDLRDSGQRYVEAVNGITDAVNGRLTRKGSITSAASTQNSDVSGAEALDSSVAGPGDASVTPSSCVLSPRDNVAASHDTAAKLVVADQSPRVYSDASAVLVGTQVAMSGPAQPSAFQNEVELEKSVPFTLQQQQFGVQQSGMDILPPTPYVHPFVDSRQEVMNHADYVQLPPQGGFPNSQHLGKHGPAFTEQQFHDNIQSFVPHQFIPAVPMTMTPSASHVSARPNVPQPLMQPQQIRLDQYNDESTSGPKIIQLPVEQNYNAYPVQVPSVVVAGNYGWVQVPPQENVMLSDGLLPQQQVRIPEKFQKEEDCYMCQKLLPHAHSDPLVPDQRDGVASSISDSILSYHGLPMEENLQAQATNRVMVTSPLMDGAIEQGIDTKSRVVSKVESPRGIPFANATGLSYKLESGERNVIQKPAAFDYLRSPIISDVFGKAVDSQSPTDGFMGTAPLSCLDVVGQQTVPLENWVKQDVLMNKPVYSDTTPVQESPTEHTNEFVNLVSQPVECSQIAQTSVWDIPESKSGNLLKDDNLPSVRSGDVQNSSNSLFSNQDPWNVHHSTYFPPPRPSKVPSKKEIYSSKDHFGEELTGDSGEQNLEAQLEDSLYQPFKQSLYLDHGYSAKGSAEDQIKQDLQAVAEGVAASVLHPSTPSPDLHGRDVSSQEDVGDVDDLNRSKALDVKSKLPEKPNFGIPLSDGLEGLQIIKNCDLEQLRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERMRTDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEFMVNGSLRNALQKSDRNLDKRKCLLIALDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWEILTGGEPYADLHYGAIIGGIVSNTLRPPVPDSCDPEWKLLMERCWSSEPSERPSFTEIANELRSMASKVPPKGQAQQQQPSALQAQVLK 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0966 1299 MobiDBLite consensus disorder prediction 830 852 - -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 335 368 - -
Lele23g0966 1299 CDD STKc_MAP3K-like 1015 1272 - -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 155 184 - -
Lele23g0966 1299 ProSitePatterns Protein kinases ATP-binding region signature. 1015 1046 IPR017441 GO:0005524
Lele23g0966 1299 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 208 292 - -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 335 349 - -
Lele23g0966 1299 SMART PB1_new 203 292 IPR000270 GO:0005515
Lele23g0966 1299 SMART serkin_6 1009 1275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0966 1299 Pfam Protein tyrosine and serine/threonine kinase 1010 1272 IPR001245 GO:0004672|GO:0006468
Lele23g0966 1299 MobiDBLite consensus disorder prediction 1276 1299 - -
Lele23g0966 1299 SUPERFAMILY Protein kinase-like (PK-like) 1004 1271 IPR011009 -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 155 172 - -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 946 967 - -
Lele23g0966 1299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1134 1146 IPR008271 GO:0004672|GO:0006468
Lele23g0966 1299 PRINTS Tyrosine kinase catalytic domain signature 1128 1146 IPR001245 GO:0004672|GO:0006468
Lele23g0966 1299 PRINTS Tyrosine kinase catalytic domain signature 1199 1221 IPR001245 GO:0004672|GO:0006468
Lele23g0966 1299 PRINTS Tyrosine kinase catalytic domain signature 1243 1265 IPR001245 GO:0004672|GO:0006468
Lele23g0966 1299 PRINTS Tyrosine kinase catalytic domain signature 1091 1104 IPR001245 GO:0004672|GO:0006468
Lele23g0966 1299 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Lele23g0966 1299 PANTHER SERINE-THREONINE PROTEIN KINASE 245 1274 - -
Lele23g0966 1299 Gene3D - 209 292 - -
Lele23g0966 1299 Gene3D Transferase(Phosphotransferase) domain 1 1097 1298 - -
Lele23g0966 1299 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1002 1096 - -
Lele23g0966 1299 MobiDBLite consensus disorder prediction 1280 1299 - -
Lele23g0966 1299 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1097 1289 - -
Lele23g0966 1299 ProSiteProfiles Protein kinase domain profile. 1009 1276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0966 1299 CDD PB1_UP2 192 290 - -
Lele23g0966 1299 Gene3D Phosphorylase Kinase; domain 1 1002 1096 - -
Lele23g0966 1299 SUPERFAMILY CAD & PB1 domains 204 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0966 Lele-ChrLele23 15319232 15325662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0966 921 1292 MAP Kinase Kinase Kinase AT3G46920 75.462 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele23g0966 PK_Tyr_Ser-Thr 8.7e-60 CL0016