Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele23g0964 | ATGGCTGGTATGCTTCCTGGAGTCGAATCTGCTAGAAGGAGACGCGTCCATCAGACTGGGGCTTCAGCTGATTGCCCTTATTTCACCAGACGATCTTCCCTCTGTTTATATTCAAGCAAACATGAATTCCTTCATTCCTCCTCTTCTCTGCAGCAAAGAAGCGTATTATACCAGGCGCGCACAGATGAGAAGCTCGCCGGAGCAGCCGGAGAAGCCAAAGAAAGATTGAATGAGAGATTAAGATCGGCCGAAATGAAATCATCTAACAAAAGGCAAAACGTTAAAGAGAAGAAGAAAAGCAGAGAAGGAAGAGCAGAGCTACAGATAGAGGTATACGGATCAAAGAAAAGTGGTCGGTCAAGGATGATGTTCAATTGGAGGAAATTGAGCTGGAAGGCTTCAGATCAAGAGGATTGTGCTGTGTGCTTGGAGTCATTCCAGGTTGGGGAAAGACTGATCCATCTTCCTTGTGCTCACAGGTTTCATTGCAGCTGCTTGGAGCCATGGCTACAAAATAATAGTTATTGCCCATGTTGCAGAACTTCCATTATTATCTCTCACTAG | 564 | 0.4521 | MAGMLPGVESARRRRVHQTGASADCPYFTRRSSLCLYSSKHEFLHSSSSLQQRSVLYQARTDEKLAGAAGEAKERLNERLRSAEMKSSNKRQNVKEKKKSREGRAELQIEVYGSKKSGRSRMMFNWRKLSWKASDQEDCAVCLESFQVGERLIHLPCAHRFHCSCLEPWLQNNSYCPCCRTSIIISH | 187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele23g0964 | 187 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 119 | 185 | IPR013083 | - | |
Lele23g0964 | 187 | CDD | RING-H2_PA-TM-RING | 138 | 180 | - | - | |
Lele23g0964 | 187 | Pfam | Ring finger domain | 138 | 180 | IPR001841 | - | |
Lele23g0964 | 187 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 58 | 181 | - | - | |
Lele23g0964 | 187 | FunFam | Zinc finger family protein | 111 | 185 | - | - | |
Lele23g0964 | 187 | SUPERFAMILY | RING/U-box | 127 | 185 | - | - | |
Lele23g0964 | 187 | SMART | ring_2 | 139 | 179 | IPR001841 | - | |
Lele23g0964 | 187 | ProSiteProfiles | Zinc finger RING-type profile. | 139 | 180 | IPR001841 | - | |
Lele23g0964 | 187 | Coils | Coil | 73 | 93 | - | - | |
Lele23g0964 | 187 | MobiDBLite | consensus disorder prediction | 83 | 102 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele23g0964 | Lele-ChrLele23 | 15289399 | 15290747 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele23g0964 | 1 | 81 | C3H Transcription Factor Family | AT2G15580 | 48.421 | 2.06e-17 | 72.4 |