Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0964 ATGGCTGGTATGCTTCCTGGAGTCGAATCTGCTAGAAGGAGACGCGTCCATCAGACTGGGGCTTCAGCTGATTGCCCTTATTTCACCAGACGATCTTCCCTCTGTTTATATTCAAGCAAACATGAATTCCTTCATTCCTCCTCTTCTCTGCAGCAAAGAAGCGTATTATACCAGGCGCGCACAGATGAGAAGCTCGCCGGAGCAGCCGGAGAAGCCAAAGAAAGATTGAATGAGAGATTAAGATCGGCCGAAATGAAATCATCTAACAAAAGGCAAAACGTTAAAGAGAAGAAGAAAAGCAGAGAAGGAAGAGCAGAGCTACAGATAGAGGTATACGGATCAAAGAAAAGTGGTCGGTCAAGGATGATGTTCAATTGGAGGAAATTGAGCTGGAAGGCTTCAGATCAAGAGGATTGTGCTGTGTGCTTGGAGTCATTCCAGGTTGGGGAAAGACTGATCCATCTTCCTTGTGCTCACAGGTTTCATTGCAGCTGCTTGGAGCCATGGCTACAAAATAATAGTTATTGCCCATGTTGCAGAACTTCCATTATTATCTCTCACTAG 564 0.4521 MAGMLPGVESARRRRVHQTGASADCPYFTRRSSLCLYSSKHEFLHSSSSLQQRSVLYQARTDEKLAGAAGEAKERLNERLRSAEMKSSNKRQNVKEKKKSREGRAELQIEVYGSKKSGRSRMMFNWRKLSWKASDQEDCAVCLESFQVGERLIHLPCAHRFHCSCLEPWLQNNSYCPCCRTSIIISH 187
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0964 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 185 IPR013083 -
Lele23g0964 187 CDD RING-H2_PA-TM-RING 138 180 - -
Lele23g0964 187 Pfam Ring finger domain 138 180 IPR001841 -
Lele23g0964 187 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 58 181 - -
Lele23g0964 187 FunFam Zinc finger family protein 111 185 - -
Lele23g0964 187 SUPERFAMILY RING/U-box 127 185 - -
Lele23g0964 187 SMART ring_2 139 179 IPR001841 -
Lele23g0964 187 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Lele23g0964 187 Coils Coil 73 93 - -
Lele23g0964 187 MobiDBLite consensus disorder prediction 83 102 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele23g0964 Lele-ChrLele23 15289399 15290747 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0964 1 81 C3H Transcription Factor Family AT2G15580 48.421 2.06e-17 72.4