Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0941 ATGGATGGGCACACGGGGAAGGCTGCGGAGAAGGGGAAGGAGGAGGTCCGGTACCGGGGAGTGAGGAGGCGGCCATGGGGGAAGTACGCGGCGGAAATTAGGGATCCGTCGAGGCAAGGGGTGAGGCAGTGGCTTGGGACGTTTGATACGGCGGAAGAAGCAGCAAGAGCGTACGATAAAGCCGCCTTTAACATGAGAGGTCATCTCGCAGTCCTTAATTTCCCCACCGAATACTATGCTCAATTACGAGGATCCCCACCATATCCTCTCTATTTAGCTTCTTCTTCTCCACCTTCTTCGTCGTCATCGTTTTCTTTTCATGGCCATGCAAGTGGGAGCTCGTCGTCTTCGTTGTCTGGTTCACTACGGAGGCAAGTTTTCGAGTTTGAGTGTTTGGATAATCAAGTGCTTGAAGACCTTCTTGAACCAGAAGACGAGAAGAAGAAAAGTGGTGGAGATTGA 462 0.5195 MDGHTGKAAEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGVRQWLGTFDTAEEAARAYDKAAFNMRGHLAVLNFPTEYYAQLRGSPPYPLYLASSSPPSSSSSFSFHGHASGSSSSSLSGSLRRQVFEFECLDNQVLEDLLEPEDEKKKSGGD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0941 153 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Lele23g0941 153 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Lele23g0941 153 MobiDBLite consensus disorder prediction 94 118 - -
Lele23g0941 153 FunFam Ethylene-responsive transcription factor 2 16 77 - -
Lele23g0941 153 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Lele23g0941 153 MobiDBLite consensus disorder prediction 91 118 - -
Lele23g0941 153 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Lele23g0941 153 PANTHER DNA-BINDING DOMAIN 9 146 IPR044808 GO:0003700|GO:0009873
Lele23g0941 153 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Lele23g0941 153 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Lele23g0941 153 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Lele23g0941 153 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0941 Lele-ChrLele23 15075131 15075592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0941 14 148 AP2-EREBP Transcription Factor Family AT3G23230 58.519 4.97e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele23g0941 AP2 3.5e-15 CL0081