Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0935 ATGAATGCTGATTCTTGGCTAACGATCGGAAAAGGACAGGAAATCTCCTCCGTAATATTGTCCCCTTTCCCAGTTTCCGTCATTGTAGCATCGAGCAGAGAGGTTGTGGAGGGGCTTCGTTCGTCGGAGCGTGAACATTTGATGCAGGCATTTTTTGGATTCGTAGTTCTCTTATTATTGACTCCATGGTCGTATGTTATCATCAGACACATTGAGCGGCGAGTGAATTCAAACTCACAAAATATACTTTCAGAGTTGCAATCTGAAATTTACCACGCTGCCAAACTATTACACCCCTTGAATTCATCATCAACCAATTTAGCTCGCCTTCTGGGTTCAACCTTCAACAAGACGACTAATGTCTCCTTCTTTGACATTCAGACCAAAGTGGCTCCAGTGTTGTTTCAAGCACTTCAGATGATTCCTCACTTGACTGAGATCTCATACATTGGTATAGAGGGTCTCTTCTTCTCATACTACATCGATCATAATCGAACTCTTGCATTGTACTCTAACTCTTCGCTTTCTTCAAAAACTCTGTATTATGTTCAACCTATAAACCCTAGCACTGGACGATTATATGGTGAATCCAGAATATATGAGCCTCCTATTAATGCAAGTTGGATTCAGGAAGCAGTGAATAGTACTTCCCATAGATATTCCTCATTAGGTTACCTGTGGAGCAATGATCATCAAGTTTTATACGTTAATTCAGTGAGAATATCAAGAACTACAGGAGTGATCTCATTAGGGTTTGAAGCAACTTCAATTATTGATTTTCTCAATCCTATTGGGCGTCAAGGTGCAAGTTTATTGTATTTGGCTTCCAGACATGATGGGAAAGTGATTCTTGAAGGATTCCAAAGAGCCCAAATAGTATTCTCTAATGATACAGCTTCCTTCCATTTAGTGAAATCAAATGGTGACCAAACGAGTTATCAAGGCTCCGTTTCATGCAAGGATGAAGCCTCTGCTTCTGTTTTAAAAATTGGGGCCACTCATTATTTGATTCGCTGCTCATCAATTGATGTAATGGGAGTAGAATCAGTTTATGTCATAGCTATACCACAAAATGGATTGGTGGCCTTTATACATAAGAGTGGAAGACTGGGGTTAGTGCTAATGAGTTCTATGATAGTTACTATATTGATTTCCATCTCCAGTTTTCTGTTGTTAAATGCTATAATGGGTTGGCGAGAGATTCGTTTGTGTGCCTCTCTAATCAAACAAATGGAAGCTACTCAACAAGCTGAGAGGAAAAGTATGAACAGGAGTCTTGCATTTTCCAGTGCAACCCATGATATTCGTGCTTCTCTTGCTGGCCTTATTGGTTTGGTAGAGATGTCCTGTGAAGAACTTGTCCCTGATTCTGAACTAGAGATCAATTTAAAGCAAATGGGTGCTTGTATAAAAGATTTGCAAGGGCTATTGAATTCTGTTCTTGATACAAGTAAAATTGAGGCAGGGAAAATGCAACTTGATGAACAGGAATTTGATCTATCACAGTTCATAGAAGATAAAGTTGACTTATTTCATCCTGTGGCTATGAAGAAAGGTGTAGATCTTGTATTGGACCACTGTGATGGTTCGGTTATCAGATATTCGCGTGTAAAAGGCGACAAAGGAAAGCTTCAACAAGTTTTGTGTAATTTATTGAGTAATGCTGTTAAATTTACTGATAAAGGACACATAGTAGTTCGAGCTTGGGCTCAAAAACCAAGCTTTCAGAACTCAATAATTTCTACTCACAGATTCAACAGTTTCATGAAACTCTGCTTGTCACGCGTATTATTTCGCAAAAAAAATGAAGCAGATGTTCATGTAGAAGCCATGAATAACACAATCCAACAAGATTCAAACTACTTGGAGTTTGTGTTTGAAGTGGATGACACTGGAAAAGGGATTCCTAAAGAGAAGCAAGCTTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAAACTGCTTTAGGACTAGAAGGCACTGGCTTGGGACTTGGTATTGTGCGATCATTGGTCCATTTGATGCATGGAGATATTGGAATTGTGGACAAGGAAATTGGTGAAAAAGGAACATGCTTTAGATTCAGTGTCCTCCTAGCAGTAAGTGAGACAGTCACTGGTATCAATAATAGTACTAGGGAAGGTAATGATTTGAATCAACATCAAGAACAAGATATAAAAGAAACTAGTTCTGGTTCTGGCATATGCTCCCCAAGTCCAAGATTACCTATTTTTGCCTCTAATAAGTTAGCGGATTCTCAAGTTGTTCTTCTGATTCAAAATGAGGGGCGTCGAAGGATTACCAAAAGGTTCATGGAGAGATTAGGGATTAAAGTTAAGGTTGTGAAGAAGTGGGAACATTTGTCTCATACTCTCAAGAAGATCAAGCAAAAGCAGTGCAATTCCAGCCCAAGCTCTGCGGGAACATCATCATGTATGAGTTCTGATCAGTCTACACCTCACAATTATAATAATGCTAGAGCCAAAGGATTTCCTTTGAGTGCTGCAGATGGATCATCAGACTTTATCTCTTCAGTTTTTGACAAGTTAGAAGATGGAGTTTCCATGGGTTTAGTTCTGCTTGTGATTGATGCATTAGCAGCACCCTTTGAAGAACTTGGCATAATGATATTAGATTTCAGAAGAGGCCTCAGAAATCCTTGTAAGGTTGTTTGGTTAAATAAGCCACTTGCGGGCAACGTCGATGAAAATGTGATTGATCCAAATGATGACATTGTCCTGTCTAAACCATTACATGGTACTCGTTTGTTTAACATTATCAGGCTTCTTCCTGAGTTTGATGGTGGAATTGGAAGGGCAAGTAGAAACATTTTTCACAACACAATGAGAAAAACATTGAAGAAATCCTCAGTATCAAGATATCAATCACCCCCATTTCAAGATGTTGAACTACAAGATTGTGATGATAGTGCATGGAGGATGGAACAAATGCAATATTCTAATGGTAAGTCCAAGGCAAGGAATATTTCTCAAGTTGATCATCATGGAGGGATACAAGAATGTGGCACTTCAAGTAGTGCCAAGCCCTTGAGTGGAAAAAGATTTTTGGTTGTTGATGACACTGAATATCTACGTATGATAGCTTTTAAGACTTTGAAACAGCTAGGCGCGACAAGTATGGAATGTAGTAATGGTGAAGATGCAGTGAACCTGGTTGAAGAGACTCTAACCGGGGCTTCCCCGAATCCTCCTTGTGATTATATCATAATGGATTGTGAGATGCCGGTGATGGACGGATTTGAGGCAACAATGAAGATAAGGAAGATGGAGAAGAGTTATGGGGTTTACATCCCTATCATGGCATTAACAGCTCATACGTCAGAGAAGGAGACAAATAAGATCAAAGAGGCAGGAATGGATGCTCATTTAAGTAAGCCACTAAAGAAAGAGCATTTATTGGATGCCATCAGATATATTGACAGTAAATTGTGTTAA 3453 0.3921 MNADSWLTIGKGQEISSVILSPFPVSVIVASSREVVEGLRSSEREHLMQAFFGFVVLLLLTPWSYVIIRHIERRVNSNSQNILSELQSEIYHAAKLLHPLNSSSTNLARLLGSTFNKTTNVSFFDIQTKVAPVLFQALQMIPHLTEISYIGIEGLFFSYYIDHNRTLALYSNSSLSSKTLYYVQPINPSTGRLYGESRIYEPPINASWIQEAVNSTSHRYSSLGYLWSNDHQVLYVNSVRISRTTGVISLGFEATSIIDFLNPIGRQGASLLYLASRHDGKVILEGFQRAQIVFSNDTASFHLVKSNGDQTSYQGSVSCKDEASASVLKIGATHYLIRCSSIDVMGVESVYVIAIPQNGLVAFIHKSGRLGLVLMSSMIVTILISISSFLLLNAIMGWREIRLCASLIKQMEATQQAERKSMNRSLAFSSATHDIRASLAGLIGLVEMSCEELVPDSELEINLKQMGACIKDLQGLLNSVLDTSKIEAGKMQLDEQEFDLSQFIEDKVDLFHPVAMKKGVDLVLDHCDGSVIRYSRVKGDKGKLQQVLCNLLSNAVKFTDKGHIVVRAWAQKPSFQNSIISTHRFNSFMKLCLSRVLFRKKNEADVHVEAMNNTIQQDSNYLEFVFEVDDTGKGIPKEKQASVFENYVQVKETALGLEGTGLGLGIVRSLVHLMHGDIGIVDKEIGEKGTCFRFSVLLAVSETVTGINNSTREGNDLNQHQEQDIKETSSGSGICSPSPRLPIFASNKLADSQVVLLIQNEGRRRITKRFMERLGIKVKVVKKWEHLSHTLKKIKQKQCNSSPSSAGTSSCMSSDQSTPHNYNNARAKGFPLSAADGSSDFISSVFDKLEDGVSMGLVLLVIDALAAPFEELGIMILDFRRGLRNPCKVVWLNKPLAGNVDENVIDPNDDIVLSKPLHGTRLFNIIRLLPEFDGGIGRASRNIFHNTMRKTLKKSSVSRYQSPPFQDVELQDCDDSAWRMEQMQYSNGKSKARNISQVDHHGGIQECGTSSSAKPLSGKRFLVVDDTEYLRMIAFKTLKQLGATSMECSNGEDAVNLVEETLTGASPNPPCDYIIMDCEMPVMDGFEATMKIRKMEKSYGVYIPIMALTAHTSEKETNKIKEAGMDAHLSKPLKKEHLLDAIRYIDSKLC 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0935 1150 Gene3D - 410 490 - -
Lele23g0935 1150 ProSiteProfiles Histidine kinase domain profile. 430 700 IPR005467 -
Lele23g0935 1150 CDD HisKA 424 485 IPR003661 GO:0000155|GO:0007165
Lele23g0935 1150 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 411 491 IPR036097 GO:0000155|GO:0007165
Lele23g0935 1150 CDD REC_hyHK_CKI1_RcsC-like 1021 1142 - -
Lele23g0935 1150 Gene3D - 491 705 IPR036890 -
Lele23g0935 1150 SMART HisKA_10 423 489 IPR003661 GO:0000155|GO:0007165
Lele23g0935 1150 MobiDBLite consensus disorder prediction 795 820 - -
Lele23g0935 1150 ProSiteProfiles Response regulatory domain profile. 1020 1146 IPR001789 GO:0000160
Lele23g0935 1150 SUPERFAMILY CheY-like 1015 1144 IPR011006 -
Lele23g0935 1150 PRINTS Bacterial sensor protein C-terminal signature 624 638 IPR004358 GO:0016310|GO:0016772
Lele23g0935 1150 PRINTS Bacterial sensor protein C-terminal signature 642 652 IPR004358 GO:0016310|GO:0016772
Lele23g0935 1150 PRINTS Bacterial sensor protein C-terminal signature 658 676 IPR004358 GO:0016310|GO:0016772
Lele23g0935 1150 SMART REC_2 1019 1142 IPR001789 GO:0000160
Lele23g0935 1150 Gene3D - 999 1147 - -
Lele23g0935 1150 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 478 696 IPR036890 -
Lele23g0935 1150 PANTHER TWO-COMPONENT HISTIDINE KINASE 69 1143 - -
Lele23g0935 1150 SMART HKATPase_4 539 700 IPR003594 -
Lele23g0935 1150 Pfam Response regulator receiver domain 1022 1143 IPR001789 GO:0000160
Lele23g0935 1150 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 539 698 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0935 Lele-ChrLele23 15007525 15012989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0935 52 1148 Histidine Kinase Gene Family AT2G47430 38.158 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele23g0935 HATPase_c 4.7e-23 CL0025