Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0921 ATGGCTATCGCTGTTTTGGCTTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGGATTTGTTGCAGTCAAAGGATTGTGGTGCGAATTGGGTAGCCTATTCATATTCTCATGGTCAAGAACTATTTTACATAAACGGGAATGTTGTTAGTAAATACACTTTCTGCAAGACCCTTCAGTTGTATATGGCAAATGGTTGTGATGCGAAGTACTATTTTGGAAGTACAACCTGTGGGCTGGAAGTTTCTTTTGGAAGAAAGCTCTTGCAGAAGGATATAAGCAATAACCCAACATCCCCAGGTCACAAGAACGTTTCTAGGCCCCTATCAGCCTCGAAAGTTGGTATAGCTGCAAGTGGAGTTTTGTTTGTATGTTGTGCTTTTCTGTGTCCTTGTTTCTATGGGAAGAAACAAAAAGCCACTGCTCATGCTGGTCTGTCCAAGGACCCAAATTCAATTTATTCAGCTTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGACCCAGGGCTCTCTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAACGTCTCAAAAACTCAGTAGACTTGGGTCAATACATCTCAACTTGAGTCAGGTTATAAAAGCTACTCATAATTTCTCGAAAAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTTTACAAGGCTCAGCTAGAAGGTGGTCAGGTTGTGGCAGTAAAGCGTGCCAAAAGGGAACAATTTGAGAATTTGAAAAACGAATTCAGCAGTAAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATTGCAGAGTATGTCCCAAATGGTACTCTTAGAGAACACTTGGATGGTTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCTTGACCTATCTGCATCGTTACGCAGAAAAGCCAATTATCCATAGAGATGTGAGATCATCCAACATTCTTCTAACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCACTGGACTCTGATCAAACACACATATCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCAGAGTATATGAAAACATATCAGCTTACTCCCAAGAGTGATGTTTATTCATTTGGAATTTTGCTTATAGAAATTGTGACCGGCCGCCGTCCTGTGGAGGTGACGAAACCTGTTGAAGAGAGGGTCACATTGAGATGGGCTTTCAGGAAGTATACTGAAGGAAATGTGGCAGAAATGGCGGATCCTTTAATGGAGGAAGGTATAAATGGAGAGGTTCTGATGAAGATGATTGGTTTAGCAATTCAATGTGCAGCACCGAGTCGAGCTGATCGGCCCGACATGAAATCGGTGGGAGAACAAATGTGGACGATCAGGGCAGAATTCCTCAAGAGTTCAAAGAAAGTATAA 1491 0.4185 MAIAVLAFMLLLQLPRIFGFGDLLQSKDCGANWVAYSYSHGQELFYINGNVVSKYTFCKTLQLYMANGCDAKYYFGSTTCGLEVSFGRKLLQKDISNNPTSPGHKNVSRPLSASKVGIAASGVLFVCCAFLCPCFYGKKQKATAHAGLSKDPNSIYSASSLEGNSVSEKTQGSLHRVPPSPSRFSTSQKLSRLGSIHLNLSQVIKATHNFSKKLQIGEGGFGTVYKAQLEGGQVVAVKRAKREQFENLKNEFSSKVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVRSSNILLTESMRAKVADFGFARLGPLDSDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLIEIVTGRRPVEVTKPVEERVTLRWAFRKYTEGNVAEMADPLMEEGINGEVLMKMIGLAIQCAAPSRADRPDMKSVGEQMWTIRAEFLKSSKKV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0921 496 Pfam Protein tyrosine and serine/threonine kinase 214 480 IPR001245 GO:0004672|GO:0006468
Lele23g0921 496 CDD STKc_IRAK 216 478 - -
Lele23g0921 496 Gene3D Phosphorylase Kinase; domain 1 179 286 - -
Lele23g0921 496 ProSiteProfiles Protein kinase domain profile. 210 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele23g0921 496 MobiDBLite consensus disorder prediction 167 187 - -
Lele23g0921 496 ProSitePatterns Tyrosine protein kinases specific active-site signature. 331 343 IPR008266 GO:0004672|GO:0006468
Lele23g0921 496 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 481 - -
Lele23g0921 496 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Lele23g0921 496 SUPERFAMILY Protein kinase-like (PK-like) 194 484 IPR011009 -
Lele23g0921 496 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 287 496 - -
Lele23g0921 496 Gene3D Transferase(Phosphotransferase) domain 1 287 495 - -
Lele23g0921 496 SMART tyrkin_6 210 482 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0921 Lele-ChrLele23 14623110 14627176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0921 116 486 Receptor kinase-like Gene Family AT3G46290 39.892 1.11e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele23g0921 PK_Tyr_Ser-Thr 9.4e-49 CL0016