LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele23g0911	ATGCAGGAGTCAACAACAAAGAAGCTAATAGCAAGTATGAGTGCCACCATTGAGAATCATGAATATGATTCTATTTCCTCTTTGAATCCTATGATAAGTGTGGTAACTGATCACTTTTACCATGCTGTGTTAAATGCTGCTATTGAGATGAACTTGTTTGAGATCATTGATAAGGGAAGCTCTAAAGGCATGTCCTCCTCTGAAATCGCTTCAAAGCTCCCAAATCCACATGCTGGCATGGCTCATCGACTCGACCGAATGTTGTTTTTGCTTTCTAATTACTCTCTGTTGACTTGTTCTTCTTCCAACAAAATTGATCAACATGGTAGGATTGAGAGGCTTTATGCTCTATCTCCTACTGGTAAATACTTAATCCCTGATAAGGATGGAGCCTCTTGCGTTAGCTTCTTCAAATTATGTAATCATCCCGCGTACAAAAAACTTTGGCAAAACTTGAAGCTAGCGATTCTTGATGAGGAAGAGGACCTTTTCAAGAAAGTTCATGGGATGTCTCTGTTTGAATATATTGAAATAGATCCAACATTCAAAACTATTTTCCATAAGGTAATGGCTGATTCGTCAGTCATCCAGATGAATGATGTACTTGAAATATATAAAGGATTTGAGGGAATATCGACCCTTGTTGATGTGGCTGGTGGCATTGGCCAAAGCCTCAAAATGATCATCTCCAAGTATCCTTCAATTCAGGGCATTAACTTCGACTTGCCACAAGTGATACAACATGGCCTATCCCATCTAGGAATGAAGCATGTTGGAGGAGATATGTTCAAAAGCGTTCCCCGAGGAGATGCTATAATGATGAAGCTTATAACTCATAACTGGGGAGATGAAAAGTGCATACAACTTTTGAAAAACTGCCATAGATCTCTGAATAATGAAGGAAAGCTTATTATTATTGACATAATAATGCCAGAAATACCCAATGGAAGCGACGAGCATAAGAATGCTTCAGTTGCTGACAACACCATGTTTATTCTAGCTGGTGGGAAGGAAAGAACTGGGAAAGAATTTGAAGCTCTTTGCAAAGCAAGTGGCTTTTCTAGCTACCGAATTGCAGCTCGTGTTCCCTCCGCTGCTTTGGGAGTCATTGATAGTGTGACATATTCTTTTGGTATATATGATGCTAGGCAAAACTTGAAGCTAGTGATTCTTGACGAGGAAGAGGACCTTTTCAAGAAAGTTCATGGGATGTCTCTGTTTGAATATATGGAAATAGATCCAACATTCAAAACTATTTTGCATAAGGCAATGGCTTATCCGTCAATTATCCAGATGAATGAGGTACTTGAAATATATAAAGGATTTGAGGGAATATCAACACTAGTTGATGTGGCTGGTGGCATTTGCCAAAGCCTCAAAATGATCATCTCCAAGTATCCTTCAATTCAGGGCATTAACTTCGACTCACCACAAGTGATCCAACATGGCCTATTCCATCTAGGTAACGTACAAAACTAA	1479	0.3928	MQESTTKKLIASMSATIENHEYDSISSLNPMISVVTDHFYHAVLNAAIEMNLFEIIDKGSSKGMSSSEIASKLPNPHAGMAHRLDRMLFLLSNYSLLTCSSSNKIDQHGRIERLYALSPTGKYLIPDKDGASCVSFFKLCNHPAYKKLWQNLKLAILDEEEDLFKKVHGMSLFEYIEIDPTFKTIFHKVMADSSVIQMNDVLEIYKGFEGISTLVDVAGGIGQSLKMIISKYPSIQGINFDLPQVIQHGLSHLGMKHVGGDMFKSVPRGDAIMMKLITHNWGDEKCIQLLKNCHRSLNNEGKLIIIDIIMPEIPNGSDEHKNASVADNTMFILAGGKERTGKEFEALCKASGFSSYRIAARVPSAALGVIDSVTYSFGIYDARQNLKLVILDEEEDLFKKVHGMSLFEYMEIDPTFKTILHKAMAYPSIIQMNEVLEIYKGFEGISTLVDVAGGICQSLKMIISKYPSIQGINFDSPQVIQHGLFHLGNVQN	492

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele23g0911	492	Gene3D	Vaccinia Virus protein VP39	125	370	IPR029063	-
	Lele23g0911	492	Gene3D	Vaccinia Virus protein VP39	371	491	IPR029063	-
	Lele23g0911	492	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	393	482	IPR029063	-
	Lele23g0911	492	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	379	492	IPR016461	GO:0008168
	Lele23g0911	492	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	132	358	IPR029063	-
	Lele23g0911	492	PANTHER	O-METHYLTRANSFERASE	394	483	IPR016461	GO:0008168
	Lele23g0911	492	Pfam	O-methyltransferase domain	149	354	IPR001077	GO:0008171
	Lele23g0911	492	Pfam	O-methyltransferase domain	386	486	IPR001077	GO:0008171
	Lele23g0911	492	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	32	374	IPR016461	GO:0008168
	Lele23g0911	492	Gene3D	-	10	124	IPR036388	-
	Lele23g0911	492	SUPERFAMILY	"Winged helix" DNA-binding domain	34	129	IPR036390	-
	Lele23g0911	492	Pfam	Dimerisation domain	43	91	IPR012967	GO:0046983
	Lele23g0911	492	FunFam	Caffeic acid 3-O-methyltransferase	12	124	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele23g0911	Lele-ChrLele23	14470108	14476584	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele23g0911	398	488	Monolignol Biosynthesis Gene Families	AT5G54160	52.747	4.03e-25	104