Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele23g0894 | ATGGCATGGTCTAATGGTGGTAACTTATCGGCCCAGAAGTGGGCTCGCCGGACTCGGCCTAGCTACGTTTCTCGTTGGAGGAACAATGGCATGCCTGGTTTCAACAATGTGAATTCATTCATGTCTGCAAATGGGTCAGCTCAGTCTGGTTTCGCTTCCTTCAACTCTTACAATTCCAGACAACAAGCTTCGGGTGGTGCGCGTTACGGTCGTTTCGGTGGTCGTGGTCGTGGTCGTGGTAGAGGCCGGAGGTTTGATCAACCGGATGAGACTGATGAGCCGAACCGTTACCCGAATCGAAACGGTTTTGGGATTCCTGGCGCGCTTGAGACTACGGAGAGTTTCGAAGAAGATGCCGATGACTCTGGTGGTATCAATTTTGACGCATATGAAGATATTCCAGTGGAGGTCAGTGGTTCCGACGTACATCCACCGGTCAATACCTTCGCAGAAATAGAGTTGAATGAGGGTTTGAGCAAGAATATCAAGCGATGCAAGTACGTTAAACCCACTCCGATTCAGCGTCATGCGATTCCTATCGCCGTTGCTGGTCGCGACTTGATGGCTTGTGCTCAGACTGGGTCGGGGAAGACGGCGGCGTTCTGTTTCCCCATTATATCTGGGGTTTTGAAGGATCGTTCTAGGTTTTTGCCTACGGCTCGTGAGGGCTGGACGGCGTATCCCACTGCGCTTATAATGTCACCAACTAGGGAGTTATCATGCCAGATTCATGATGAGGCTACGAAGTTCGCTTATCAGACCGGAGTGAAGATTGTTGCTGCTTATGGTGGGGCACCGATTTTTCAGCAGCTTCGTAATTTAGAAAAAGGAGTGGACATCTTAGTTGCAACTCCTGGGCGCCTAGTTGATTTAATTGAGAGAGGTAGGGTTTCGCTCGCACGAATAAAATTCCTTGCGCTTGATGAGGCAGATCGCATGTTGGACATGGGCTTTGAGCCTCAAATTCGGAAGATTGTTGAGCAAATGGATATGCCTCCACCAGGTGCTAGACAGACAATGCTCTTCAGTGCTACGTTCCCAGATGATATACAGAAGCTTGCGGCGGATTTTCTTTCAAACTACATATTCTTAGCAATTGGAAGAGTTGGTTCTAGCACTGAATTGATTGTACAAAAAGTTGAACTCGTTCAGGATATGGACAAAAGAAACCATCTTGTGGATCTTCTCCGTTCTCAAAGGGTAAATGGGCTCAATGGAAAGCAAGCTTTGACTCTAGTATTTGTTGAAACTAAAAGAGGAGCAGATGCCTTGGAAAATTGGCTGTCGAGAAAAGGTTTTCCGGCTATTGCAATACATGGGGACAAAGTTCAAATGGAGAGGGAAAGAGCCTTGAGATATTTCAAAAGTGGTGCTACTCCTATTTTGGTCGCGACTGATGTTGCTTCAAGAGGTTTAGACATACCGCACGTGGCTCATGTTGTCAATTTCGACTTGCCAAAAGATATAGATGGCTATGTTCACAGAATTGGCAGAACTGGTCGTGCCGGAAGGTCTGGTTTGGCCACTGCTTTCTTTAGTGATCAAAACATCCCTCTTGCAAAGTCCCTTGCTGAACTCATGCAAGAAGCAAACCAAAAGGTTCCCTCTTGGCTCACCCAATATGCAACAGAGAGTTCTTCATATGGCTTCCGTAGCAGCGGCAGCAGAAGGGGGCCGTGGTCTGGTAATGGCAAGTATGGCGGCCATGACTTTAGAAGCATGACTCAATATGAAGGGTATAACAACCACTATGAGGATCCAGGTTTTGCTGAGAACAACCGTGGCACTATAGCTACAGCTTCTGATATCTCTAATTCTTACAATGATTCTTATGATATAGCAAATACAGTTCCTCCTACTAGCAGCAATTACCATGACAACGATGCTGCTGACGCTTATTATGGAAGCGGGAGAGCCGATGGGCCAAACGGGCGTGCATCTGTTGTTCCTACTGGATGGGACTAG | 1965 | 0.4728 | MAWSNGGNLSAQKWARRTRPSYVSRWRNNGMPGFNNVNSFMSANGSAQSGFASFNSYNSRQQASGGARYGRFGGRGRGRGRGRRFDQPDETDEPNRYPNRNGFGIPGALETTESFEEDADDSGGINFDAYEDIPVEVSGSDVHPPVNTFAEIELNEGLSKNIKRCKYVKPTPIQRHAIPIAVAGRDLMACAQTGSGKTAAFCFPIISGVLKDRSRFLPTAREGWTAYPTALIMSPTRELSCQIHDEATKFAYQTGVKIVAAYGGAPIFQQLRNLEKGVDILVATPGRLVDLIERGRVSLARIKFLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPDDIQKLAADFLSNYIFLAIGRVGSSTELIVQKVELVQDMDKRNHLVDLLRSQRVNGLNGKQALTLVFVETKRGADALENWLSRKGFPAIAIHGDKVQMERERALRYFKSGATPILVATDVASRGLDIPHVAHVVNFDLPKDIDGYVHRIGRTGRAGRSGLATAFFSDQNIPLAKSLAELMQEANQKVPSWLTQYATESSSYGFRSSGSRRGPWSGNGKYGGHDFRSMTQYEGYNNHYEDPGFAENNRGTIATASDISNSYNDSYDIANTVPPTSSNYHDNDAADAYYGSGRADGPNGRASVVPTGWD | 654 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele23g0894 | 654 | CDD | DEADc_DDX3_DDX4 | 148 | 370 | IPR044763 | GO:0003724|GO:0005524 | |
Lele23g0894 | 654 | Pfam | DEAD/DEAH box helicase | 171 | 353 | IPR011545 | GO:0003676|GO:0005524 | |
Lele23g0894 | 654 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 147 | 175 | IPR014014 | GO:0003724 | |
Lele23g0894 | 654 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 229 | 519 | IPR027417 | - | |
Lele23g0894 | 654 | MobiDBLite | consensus disorder prediction | 618 | 654 | - | - | |
Lele23g0894 | 654 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 118 | 542 | - | - | |
Lele23g0894 | 654 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lele23g0894 | 654 | Gene3D | - | 367 | 546 | IPR027417 | - | |
Lele23g0894 | 654 | Pfam | Helicase conserved C-terminal domain | 388 | 503 | IPR001650 | - | |
Lele23g0894 | 654 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 388 | 542 | IPR001650 | - | |
Lele23g0894 | 654 | SMART | helicmild6 | 422 | 503 | IPR001650 | - | |
Lele23g0894 | 654 | SMART | ultradead3 | 166 | 379 | IPR014001 | - | |
Lele23g0894 | 654 | MobiDBLite | consensus disorder prediction | 79 | 96 | - | - | |
Lele23g0894 | 654 | MobiDBLite | consensus disorder prediction | 62 | 108 | - | - | |
Lele23g0894 | 654 | CDD | SF2_C_DEAD | 376 | 512 | - | - | |
Lele23g0894 | 654 | Gene3D | - | 106 | 366 | IPR027417 | - | |
Lele23g0894 | 654 | FunFam | Probable ATP-dependent RNA helicase DDX4 | 110 | 366 | - | - | |
Lele23g0894 | 654 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 178 | 364 | IPR014001 | - | |
Lele23g0894 | 654 | FunFam | ATP-dependent RNA helicase RhlB | 367 | 546 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele23g0894 | Lele-ChrLele23 | 14286215 | 14290026 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele23g0894 | 129 | 525 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 32.412 | 1.96e-59 | 203 |