Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0890 ATGGATAGCAACAAGGACGATGCGTTAAAATGCTTGAAAATTGGGAAAGAGGCATTACAGATCGGAGATCGGGCTCGCGCTTTGAAATTTGTTACCAAAGCTCGCCGTCTAGACCCGACTTTGCCCGTCGACGATCTATTTGCGTCGATAGAGAAAGACACAGGTGACCAACCGCCGACGGCGACTGCCAATGGTCCATCAATCACGTCTTCATCAAAGCCTTCTGATCAATCTTCTCTTCGGCAAAGGGTTTCGACAGCAGGATCTTCATCCTCTACGTCATCAGCTACATATACGGAGGAGCAAATTACGATGGTTAGAGAGATTAGGAGGAAGAAGAATTATTATCAGATTTTAGGATTAGAGAAGAGTTGTACGGTTGAGGATGTGCGGAAAGCGTACAGAAAATTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCTCCAGGAGCTGAGGAAGCGTTTAAGTCTGTGTCTAAAGCTTTCCAGTGTCTAAGTAATGATGAGAGTAGAAGGAAGTATGATCTTGTTGGAGAGGATGAATCTGTTTACGAAAGGCGTGCTGCAAGGCCGGCAACACGGGCATATAATGGGTATTATGAAGCTGATATTGATGCGGAGGAAATATTTAGGAATTTCTTCTTTGGTGGAATGGCTCCTACAACATCTTTTGGTGGATTTAGTTTTGGACCTGGGATGGGTCCCAGGCCGGCGGCTGAACATGGGTCTAGTGGCTTCAATATTCGCGCTTTAATTCAGTTGCTTCCTGTTCTGCTTATTCTGCTATTGAACTTCTTGCCGTCTTCAGATCCTATTTATTCACTATCTCGACATTATCCATATGAACATCGGTTTACTACACCAAAGGGTGTCAACTATTATGTTAAGTCGGCCAAATTTGATCAAGACTACCCTCCAAATAGCCATGAGCGAACAACACTTGAAGATAGGGTTGAGAGTGATTACCTCAATATTCTTAGAGAGAATTGTCGGCTTGAGTGGCGTCGCCGCCAATGGGGATACATCCGGGAAATGCCACATTGCGGAATGCTTCGCAAGTTTGAACCAGTGAATTAA 1077 0.4438 MDSNKDDALKCLKIGKEALQIGDRARALKFVTKARRLDPTLPVDDLFASIEKDTGDQPPTATANGPSITSSSKPSDQSSLRQRVSTAGSSSSTSSATYTEEQITMVREIRRKKNYYQILGLEKSCTVEDVRKAYRKLSLKVHPDKNKAPGAEEAFKSVSKAFQCLSNDESRRKYDLVGEDESVYERRAARPATRAYNGYYEADIDAEEIFRNFFFGGMAPTTSFGGFSFGPGMGPRPAAEHGSSGFNIRALIQLLPVLLILLLNFLPSSDPIYSLSRHYPYEHRFTTPKGVNYYVKSAKFDQDYPPNSHERTTLEDRVESDYLNILRENCRLEWRRRQWGYIREMPHCGMLRKFEPVN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0890 358 Pfam DnaJ domain 114 175 IPR001623 -
Lele23g0890 358 PANTHER AT29763P-RELATED 1 353 - -
Lele23g0890 358 MobiDBLite consensus disorder prediction 55 100 - -
Lele23g0890 358 Gene3D DnaJ domain 110 224 IPR036869 -
Lele23g0890 358 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Lele23g0890 358 Pfam Domain of unknown function (DUF1977) 267 338 IPR015399 -
Lele23g0890 358 FunFam Chaperone protein dnaJ 49 110 225 - -
Lele23g0890 358 SMART dnaj_3 113 170 IPR001623 -
Lele23g0890 358 MobiDBLite consensus disorder prediction 49 100 - -
Lele23g0890 358 CDD DnaJ 114 167 IPR001623 -
Lele23g0890 358 PRINTS DnaJ domain signature 150 170 IPR001623 -
Lele23g0890 358 PRINTS DnaJ domain signature 116 134 IPR001623 -
Lele23g0890 358 PRINTS DnaJ domain signature 134 149 IPR001623 -
Lele23g0890 358 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Lele23g0890 358 SUPERFAMILY Chaperone J-domain 111 229 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0890 Lele-ChrLele23 14241122 14242198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0890 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.437 4.66e-09 55.5